| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3663 |
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| Symbol | sbcD |
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| ID | 4040479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 198565 |
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| End bp | 199710 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979086 |
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| Product | dsDNA exonuclease SbcC |
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| Protein accession | YP_585804 |
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| Protein GI | 94312595 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.131633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTTTTC TCCACACCGC CGACTGGCAT CTTGGTCGGC TCTTCCACGC CCGTAGCCTG
ATCGAGGATC AGTCTCATGT GCTCGACCAG TTCGTCGCGC TGGTGCGCGA TCTGCGCCCC
GACGCCGTGC TGATTGCCGG CGACGTGTAC GACCGCGCGG TGCCGCCGCC GGAGGCCGTG
GCGCTGCTCG ACGATGTGCT GGCGCGTATC GTGGTGGATG CGGGCGTACC CGTGGTGATG
ATCGCAGGCA ATCACGACAG CGCCCAACGC CTCGGTTTCG GCGCGCGCCT GCTGGCCGCG
CGGGGTCTGC ACGTGGCGGG GCGCACCGGT CCGGAAACGT CCTGCGTGAC GCTGCACGAT
GCGCACGGCG AGGTGCGCAT CTACGCCTTG CCCTATGCCG AACCGGCGGC GGTGCGCGAC
GCGCTCGGCA CCGACTTGCC GACGCACGAA GCCGCATTGA ACGCCCAGCT CGACGCCGTC
CGCGCCACGC ATCCCGCAGG CGTCCGTTCT GTGGCCGTGG CCCATGCTTT CGTGGTGGGC
GGCGCGGTCA GCGAATCGGA GCGCCCGCTG AGCGTGGGCG GTAGCGGTGC CGTGGCCGCG
GACGTGTTCC ACGGCTTCGA TTTCGTGGCA TTGGGACATC TGCATCGTCC GCAATCCATC
GGCGCTAGGA TTCACTATTC GGGGTCGCTG CTCAAGTATT CGCTGTCGGA AACCGAACAC
ATCAAGACGG TATCGCTGAT CGATGTTGAC GCCGAGGGTG GCGTCCGGAT CGAGGCGATA
CCGCTGCGAC CGTTGCGCGA ACTGCGCGTG CTGACCGGCA CGCTGGCCGG CTTGCTTGAG
GCGGGCGCCA CCGACCCGCA CCGGGACGAC TACGTCCATG CGGTGCTGAC CGACGCGGGC
GCGTTGCTGG ACCCGATGGC GCGACTGCGC CAGGTCTATC CGAACGCACT GGCGATCGAG
CGCGCGGTGC TGGCGCGCAG CGGGCAGGCC GGGGAAGCGG GGCGCAAGCT GCGGGAACTG
GATACGGCCA GCCTGTTTGC GAATTTTTTC CGCGAGGTGG CTGACACAGA CCTCGACGAT
GATCAGCGCC GCGCGCTCGA CGATCTATTG GCAGTCATGC AGGCATCGGA AAGGGAGTCG
GCATGA
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| Protein sequence | MRFLHTADWH LGRLFHARSL IEDQSHVLDQ FVALVRDLRP DAVLIAGDVY DRAVPPPEAV
ALLDDVLARI VVDAGVPVVM IAGNHDSAQR LGFGARLLAA RGLHVAGRTG PETSCVTLHD
AHGEVRIYAL PYAEPAAVRD ALGTDLPTHE AALNAQLDAV RATHPAGVRS VAVAHAFVVG
GAVSESERPL SVGGSGAVAA DVFHGFDFVA LGHLHRPQSI GARIHYSGSL LKYSLSETEH
IKTVSLIDVD AEGGVRIEAI PLRPLRELRV LTGTLAGLLE AGATDPHRDD YVHAVLTDAG
ALLDPMARLR QVYPNALAIE RAVLARSGQA GEAGRKLREL DTASLFANFF REVADTDLDD
DQRRALDDLL AVMQASERES A
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