Gene Rmet_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3661 
Symbol 
ID4040477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp195365 
End bp197092 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content65% 
IMG OID637979084 
Producthypothetical protein 
Protein accessionYP_585802 
Protein GI94312593 
COG category[S] Function unknown 
COG ID[COG4655] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCACG TCACGTCCGG CTCGATCCAC CCACGCCAGC GCGGCACCGT CAGTCTGATG 
GCTGCGCTGC TGATTGCCGC CATTGGCGTC GCGGCGCTGG TGTCGCTCGA CGTCGGCTTC
GTGTTCTACA CGCAGCGGCA GTTGCAGAAG CTGGTGGACG TGGCGGCGCT TTCTGGCGCG
CAGCAATTGA AGAGCGCTGA TGATCAGGCG ACGACCAATG CCAACGTGCT GTCAAGCGTG
ACGTCCGCCG CAGCCCAGAA CGGCTACACC AAGGCCGTGG CGAATGATTG CACCACGGCA
GTGGCTGGCG CGGCGGACGG CGTGCGGACG TGCCTTGGGT TGTGGGACCC CGCCAACCCT
GCCAATGGCG ACAGCACGCG GCACTTCGAT CCGGGCTATC CGGCCACAAC GGTGTCGGCC
AATGCGGTGC GCGTGCAGGC CACGTTGACG GTACCGCTGC TGTTCATGTT CCAGGGGGGC
CAGTCGCGGC AGCTACACGC CGAGGCGATT GCCGCCGCGA GTCCGCCCGC CGCGTCGTTC
ACGCTCGGCA GCGGCCTGCT CAGGCTCTCG TCGGGTAACG GCCTGCTGGG GCTGCTGCTG
GGCAACTCGG TCAATCTGTC CGTGGCGGAC TGGAGTGGAC TGGTAGGCGC GAACGTGACG
CTCGAGCAGT TGCGTTTGCG GGCAGGTGTG GGCACAGTCG ATCAGTTGCT GAACACTTCG
CTCTCGATCC AGGACTTCTA CGCGCTGGTG CTGGGTGCGG CGGGGCAGTC GGCGCTGCTC
AACGCGGCGC TTGGCAGCCC CACGACACAG CTTGGCCTGA ATGGCATTGG CACCAAGGTG
ACGCTGGGCC AGATGCTCGA CCTGGGCGTG CTGACACCGG CGGCTTCGTC TGCGGCGGAG
GCGGCGCTCA ATGTGGCAAC GTTGCTGACC ACGGCCGCCT ATGTCGCGCG CGGGACGAGC
GCGGTGGATC TGAGTACGCT CAACGTGAAG ACCGCGCTTG GATCGATCGG CGGCTCGATG
TACATCATCC AGCCGCCGAA GGTGGCCGTG GGGCCGGCCA AGCAGTATCC GGATGGAACG
TGGAAGACCA CTGCGACGAC CGCGCAGCTT GGCCTGAAAC TGGCCGCGCA GGTCTCTGTG
CCGCTGGTAG TGGCCAACGT CAATCTGAAT CTGCCGTTGT GGCTGCAGAT CGCGCAGGCC
AAGGGAGATC TGACGCATAT CCAGTGCGCG GCTGCCGTTC CGGACCGGCG GGCGACGGTC
AATGTGTCCA CCAACGCCGT GATGGCATGC CTGGGCAACC CCGGCGGCAC CGGCTGTTCC
GGCGGCCCAC TTACCATCGC CGACGTCCAG TTGTCGGCGG TCGGACTGTT CCCCATTGCC
GATGCGAAGA TGATCGGACA GCCGATCTCG CAGTCCGGAC TGGCTGGTGC AGGCAACAGC
TTCGTACTCG CACCGGGTGG TTACGTGGCT GCATCGTCGA GCACAGTGAT CGGCGATACC
GTGACCAACG TGATCAACGG CCTCAATCCA ACGCTCGATG TCAGCCTGCT GCAACTTCAA
CTACTGAGCA TTTCCCCGGG CTGGCTGCTG CAACAGGTGC TGAATCCATT GCTCACGCTG
ATCAACCAGC TCGTCAATAC CTTGACGAGC CTGCTCGGCA TCAGCCTTGC CAACGCCGAC
TTGTGGCTCA ACGGCGTCGA CTGCAACAAC ACGGAACTCG TGTACTGA
 
Protein sequence
MRHVTSGSIH PRQRGTVSLM AALLIAAIGV AALVSLDVGF VFYTQRQLQK LVDVAALSGA 
QQLKSADDQA TTNANVLSSV TSAAAQNGYT KAVANDCTTA VAGAADGVRT CLGLWDPANP
ANGDSTRHFD PGYPATTVSA NAVRVQATLT VPLLFMFQGG QSRQLHAEAI AAASPPAASF
TLGSGLLRLS SGNGLLGLLL GNSVNLSVAD WSGLVGANVT LEQLRLRAGV GTVDQLLNTS
LSIQDFYALV LGAAGQSALL NAALGSPTTQ LGLNGIGTKV TLGQMLDLGV LTPAASSAAE
AALNVATLLT TAAYVARGTS AVDLSTLNVK TALGSIGGSM YIIQPPKVAV GPAKQYPDGT
WKTTATTAQL GLKLAAQVSV PLVVANVNLN LPLWLQIAQA KGDLTHIQCA AAVPDRRATV
NVSTNAVMAC LGNPGGTGCS GGPLTIADVQ LSAVGLFPIA DAKMIGQPIS QSGLAGAGNS
FVLAPGGYVA ASSSTVIGDT VTNVINGLNP TLDVSLLQLQ LLSISPGWLL QQVLNPLLTL
INQLVNTLTS LLGISLANAD LWLNGVDCNN TELVY