Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3661 |
Symbol | |
ID | 4040477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 195365 |
End bp | 197092 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979084 |
Product | hypothetical protein |
Protein accession | YP_585802 |
Protein GI | 94312593 |
COG category | [S] Function unknown |
COG ID | [COG4655] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCACG TCACGTCCGG CTCGATCCAC CCACGCCAGC GCGGCACCGT CAGTCTGATG GCTGCGCTGC TGATTGCCGC CATTGGCGTC GCGGCGCTGG TGTCGCTCGA CGTCGGCTTC GTGTTCTACA CGCAGCGGCA GTTGCAGAAG CTGGTGGACG TGGCGGCGCT TTCTGGCGCG CAGCAATTGA AGAGCGCTGA TGATCAGGCG ACGACCAATG CCAACGTGCT GTCAAGCGTG ACGTCCGCCG CAGCCCAGAA CGGCTACACC AAGGCCGTGG CGAATGATTG CACCACGGCA GTGGCTGGCG CGGCGGACGG CGTGCGGACG TGCCTTGGGT TGTGGGACCC CGCCAACCCT GCCAATGGCG ACAGCACGCG GCACTTCGAT CCGGGCTATC CGGCCACAAC GGTGTCGGCC AATGCGGTGC GCGTGCAGGC CACGTTGACG GTACCGCTGC TGTTCATGTT CCAGGGGGGC CAGTCGCGGC AGCTACACGC CGAGGCGATT GCCGCCGCGA GTCCGCCCGC CGCGTCGTTC ACGCTCGGCA GCGGCCTGCT CAGGCTCTCG TCGGGTAACG GCCTGCTGGG GCTGCTGCTG GGCAACTCGG TCAATCTGTC CGTGGCGGAC TGGAGTGGAC TGGTAGGCGC GAACGTGACG CTCGAGCAGT TGCGTTTGCG GGCAGGTGTG GGCACAGTCG ATCAGTTGCT GAACACTTCG CTCTCGATCC AGGACTTCTA CGCGCTGGTG CTGGGTGCGG CGGGGCAGTC GGCGCTGCTC AACGCGGCGC TTGGCAGCCC CACGACACAG CTTGGCCTGA ATGGCATTGG CACCAAGGTG ACGCTGGGCC AGATGCTCGA CCTGGGCGTG CTGACACCGG CGGCTTCGTC TGCGGCGGAG GCGGCGCTCA ATGTGGCAAC GTTGCTGACC ACGGCCGCCT ATGTCGCGCG CGGGACGAGC GCGGTGGATC TGAGTACGCT CAACGTGAAG ACCGCGCTTG GATCGATCGG CGGCTCGATG TACATCATCC AGCCGCCGAA GGTGGCCGTG GGGCCGGCCA AGCAGTATCC GGATGGAACG TGGAAGACCA CTGCGACGAC CGCGCAGCTT GGCCTGAAAC TGGCCGCGCA GGTCTCTGTG CCGCTGGTAG TGGCCAACGT CAATCTGAAT CTGCCGTTGT GGCTGCAGAT CGCGCAGGCC AAGGGAGATC TGACGCATAT CCAGTGCGCG GCTGCCGTTC CGGACCGGCG GGCGACGGTC AATGTGTCCA CCAACGCCGT GATGGCATGC CTGGGCAACC CCGGCGGCAC CGGCTGTTCC GGCGGCCCAC TTACCATCGC CGACGTCCAG TTGTCGGCGG TCGGACTGTT CCCCATTGCC GATGCGAAGA TGATCGGACA GCCGATCTCG CAGTCCGGAC TGGCTGGTGC AGGCAACAGC TTCGTACTCG CACCGGGTGG TTACGTGGCT GCATCGTCGA GCACAGTGAT CGGCGATACC GTGACCAACG TGATCAACGG CCTCAATCCA ACGCTCGATG TCAGCCTGCT GCAACTTCAA CTACTGAGCA TTTCCCCGGG CTGGCTGCTG CAACAGGTGC TGAATCCATT GCTCACGCTG ATCAACCAGC TCGTCAATAC CTTGACGAGC CTGCTCGGCA TCAGCCTTGC CAACGCCGAC TTGTGGCTCA ACGGCGTCGA CTGCAACAAC ACGGAACTCG TGTACTGA
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Protein sequence | MRHVTSGSIH PRQRGTVSLM AALLIAAIGV AALVSLDVGF VFYTQRQLQK LVDVAALSGA QQLKSADDQA TTNANVLSSV TSAAAQNGYT KAVANDCTTA VAGAADGVRT CLGLWDPANP ANGDSTRHFD PGYPATTVSA NAVRVQATLT VPLLFMFQGG QSRQLHAEAI AAASPPAASF TLGSGLLRLS SGNGLLGLLL GNSVNLSVAD WSGLVGANVT LEQLRLRAGV GTVDQLLNTS LSIQDFYALV LGAAGQSALL NAALGSPTTQ LGLNGIGTKV TLGQMLDLGV LTPAASSAAE AALNVATLLT TAAYVARGTS AVDLSTLNVK TALGSIGGSM YIIQPPKVAV GPAKQYPDGT WKTTATTAQL GLKLAAQVSV PLVVANVNLN LPLWLQIAQA KGDLTHIQCA AAVPDRRATV NVSTNAVMAC LGNPGGTGCS GGPLTIADVQ LSAVGLFPIA DAKMIGQPIS QSGLAGAGNS FVLAPGGYVA ASSSTVIGDT VTNVINGLNP TLDVSLLQLQ LLSISPGWLL QQVLNPLLTL INQLVNTLTS LLGISLANAD LWLNGVDCNN TELVY
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