| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3659 |
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| Symbol | tadD |
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| ID | 4040475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 194170 |
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| End bp | 194991 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979082 |
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| Product | flp pilus assembly protein |
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| Protein accession | YP_585800 |
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| Protein GI | 94312591 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG TGATGTCGCC CTGGTCGCGC TGGTCGCCCC GGACCCTCTT GCCAGCGTCA
CTGGCCATGC CGCTGGCAGC CGCGCTGCTA CTGTCCGGAT GCGCGTCCAC GCCGAACACA
GCGGAGGTGA TGGCGCAGCA GGCCGATGCG CAGATCGAAC TGGCGAAGCT GCGTGACAAG
GAGGCCCGCG CCGAATACAA CGATCAGTCC GTTTACCTGG GGCTGATCAA CCGGATGCAG
ACAGAGGGCA TGTACTTCGC GTCGCTGGCG CATATCGATG CCTTCCAGCA GAAGTTCGGC
AGCAATCCAT CGCTGCTGGC GATGCGGGCC GATGCCCTGC GTGAGACCGG TCAGGACGAT
GCGGCCCTGC AGGCGTACCG TGATCTGCTC GGGACCGATC GCGCCGCGCG GGCGCATCAC
GGCATTGGGC TTGTGCTCGG CAGACAGGGA GACTTTATGC GTGCCGCCGG TGAACTGCGC
CAGGCGGTGT CGATGGAGCC GGTGAACCCG CAGTACTCGA GCGATCTTGG CTACGCACTG
ATGCGAGGCG GTGCGCTGCA GGATGCCCGC GTGCCGGTGA TGCAGGCGCT GGAACTGGAT
GCCGCCAATC CGCGGTTGAT CAGCAATGCG GTGGTGTGGC TGTGGGCATC CGGCAAGCGC
GCCGAAGCCA ACGCCATGAT GCAGCGTGCC GCGATGCAGG AGCCGACGCG AGCGGCCATC
CGCAAGGAGG CGGATCGCGT CAGTCGGGCC GCGCAGGTCC GCGACAAGAC CGCGCCGCGT
GGCGCGCAGG CCGTGGCGCT CAACGCAGGA GTCAAACCAT GA
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| Protein sequence | MKTVMSPWSR WSPRTLLPAS LAMPLAAALL LSGCASTPNT AEVMAQQADA QIELAKLRDK
EARAEYNDQS VYLGLINRMQ TEGMYFASLA HIDAFQQKFG SNPSLLAMRA DALRETGQDD
AALQAYRDLL GTDRAARAHH GIGLVLGRQG DFMRAAGELR QAVSMEPVNP QYSSDLGYAL
MRGGALQDAR VPVMQALELD AANPRLISNA VVWLWASGKR AEANAMMQRA AMQEPTRAAI
RKEADRVSRA AQVRDKTAPR GAQAVALNAG VKP
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