| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3654 |
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| Symbol | cpaC |
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| ID | 4040470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 188142 |
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| End bp | 189563 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979077 |
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| Product | pilus assembly protein |
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| Protein accession | YP_585795 |
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| Protein GI | 94312586 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAA AGTTGAATCA CCGTGTTCTG GCGCGACTGG TCGCGCTGAC GATGCTGGCG
CTGGCCGCGG CGCCGATATC GCAAACGGAT GCACAAGCAG CGACACAAGC AGCGACACAA
GCAATGTCGC CGCCGACAGG TTCCTTCGAC ACCGCAGGCT CGCGCACGTT GCGCCTGCTA
GCCGGTGCGC AACAGGAAAT CCGGCCCGGA CAGGCGCTGG AGCGCGTGGC GGTGGGTAAC
CCCGAGGTGG CCGATGCACT GCTGCTCAAG CATCGGGGTG GTCCATCCAC TGTGCTCGTG
GTGGCCCGCA AGCCCGGCGT CACCGACCTC AAGATCTGGA GCCGCGATGT TGCGCCGGTC
AGCTACACGG TGCGTGTGGA TGCGGTGCGG CCCGATCCCG GCGGCGCCAG CGTTGATCTC
TCGTCCGCCG GGGCGTCGAT CAGCGGCGAG TCTCCGGATG CCCCAGCCGC CGCGCGTACG
CTGATGGCGG CGCGCGCCGC CGTCTCCAGT GCCGATGGCA AGAGGGCAGG CGTTGTGGTT
GACCGCTCGA CGGTGCCGGT CTCTGGCACT GTGCAGGTCG ACGTCAAGGT GGTGGAGATC
AGCAAGACCG TTCTCAAGGA AATCGGCCTG AACTTCTATC GCGACAACGG CGGCTTCGCA
TTCGGTACCT TCAGCCCGTC GTCGCTGACC AAGGCCACGT TCACGCCGGG CGTTGGCACG
GTCGTGGACT CGGTGTCGCC AATCAGCAGC GCTTTCAACC TGATCGCCGG ATCGGTGTCG
AAGGGCATCT TCGCCAACCT GAGCCTGATG GAAGCCAACG GTCTCGTCCG TGTGCTGGCC
GAGCCGAGCC TGGTGGCGTT GTCGGGGCAG AGCGCGAGCT TCCTGGCTGG CGGAGAAATT
CCGATTCCGG TGCCGCAGGC GCTGGGGACC ACGACGATCC AGTACAAGCC GTTCGGTATC
GGGCTCACGG TATCGCCGAC GGTGATGTCG CGCGAGCGCA TCGCGCTCAA GGTGGCGCCC
GAGGCCAGCG ATCTCGATCC TTCGCGTGGC ATCGTGCTGA ACGGCGCCAC GGTGCCGGCC
ATCGTCACGC GGCGCGCCGA CACCACGATC GAACTCGGTG ACGGCGAGAG CTTCGTGATC
GGCGGCCTGG TGAGCCGCAA CACGGTCAGC AATGTCAGCA AGGTCCCGTT CCTGGGCGAT
CTGCCGGTGA TCGGCAGCTT CTTCAAGAAC CTGAACTTCC ATCAGGAAGA CCGCGAACTG
ATGATCGTGG TCACGCCGCA CCTGATCAAG CCCCTGGCCA AGGATTCGCC CGCAGCGGCC
GGCGCGTCCC AGGACGGCCG CACCAGCGCC AATCCCAACG TCTGGGGCCG CTACATGCTG
GGCGAGTACG CGGACCAGAG CCTGCCAGGG TTCTCGAGAT AG
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| Protein sequence | MPKKLNHRVL ARLVALTMLA LAAAPISQTD AQAATQAATQ AMSPPTGSFD TAGSRTLRLL
AGAQQEIRPG QALERVAVGN PEVADALLLK HRGGPSTVLV VARKPGVTDL KIWSRDVAPV
SYTVRVDAVR PDPGGASVDL SSAGASISGE SPDAPAAART LMAARAAVSS ADGKRAGVVV
DRSTVPVSGT VQVDVKVVEI SKTVLKEIGL NFYRDNGGFA FGTFSPSSLT KATFTPGVGT
VVDSVSPISS AFNLIAGSVS KGIFANLSLM EANGLVRVLA EPSLVALSGQ SASFLAGGEI
PIPVPQALGT TTIQYKPFGI GLTVSPTVMS RERIALKVAP EASDLDPSRG IVLNGATVPA
IVTRRADTTI ELGDGESFVI GGLVSRNTVS NVSKVPFLGD LPVIGSFFKN LNFHQEDREL
MIVVTPHLIK PLAKDSPAAA GASQDGRTSA NPNVWGRYML GEYADQSLPG FSR
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