| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3648 |
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| Symbol | |
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| ID | 4040600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 180513 |
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| End bp | 182189 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979071 |
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| Product | putative activation/secretion signal peptide protein |
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| Protein accession | YP_585789 |
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| Protein GI | 94312580 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACAC GCAAGCGTGT TGCCGCATTG CTGATTGGCA TCGGCGCCAT TCATAGCGGC
CTGTCTCATG CCGAACGGAG CCCGGTCCAG GGCGACCCGA CCCAGACTCT CCCGACCATC
GCGCCGAGCA AGCCAGCGCA GAGCAATGTC ACCGTGCAGG TGGAACGGCC CGATGCGGCC
ATGCAGAATC TGCTCGCCTC GCGCCTGACG CCGAAGCATT TCAAGATCGA AGGCGCGAAA
ACGCTGCCGT TCGAACAGAT CGCCGCCAAG TTCTCACCGC TGGCTAACCG CGAGATCAGC
GTGGCCGAAC TGCTGCAGGC CGCGGAATCT GTCACCCAGA TGTACAAGGA CGCGGGATAC
CCGCTGTCGT TCGCGTTTGT GCCCGCGCAG TCGTTCGAGA ACGGCGACGT GCTGATCACC
GTGGTGGAAG GCTACGTGGC CAACGTCACG GTCCGCGGCA AGCCTGGCCC AGCCGAGGGC
CGCCTGCGCA AGATCGCGCA GCAACTGATG CGCGACCGCC CGCTGCGGCA GGAGAGCTTC
GAGCACTACG TCAACGTGCT GTCACAACAG CCGGGCATGC AGATCAACGC CACAGTGCAG
CCGCCCACCA CCACCGATGG CGCGTGCGAG ATGGTGCTCG AGGCCAAGCG CAAGCCGTTC
ACGTTCGGCA CCGGTGTGGA GTGGATGTCG CCGGGCCTGC GCGCCATCGC CACGGCCACC
ACCAACAGCC TCACGCCGCT CGGCGAGCAG CTCTCGTTCA CGACGCTTTT CCCGAAGGGC
CACAACGACG AGGAGTACTA CGCGCTCAAC TACGCCCAGC CGATCGGCAC CGAGGGCATG
CTGGCCAAGG TGACGGCGTC GCACTATCGC GGCGTGCCCG AGAACACGTC ACTGGCGCCC
ATCGGCTTCG AATCGCGCTA TGTCAACGAC TCCAAGCGTC TCGGCGGCAC GCTGAGCTAC
CCCGTGATCC TCAACAACCG CCATGCGCTC ACGCTGACCG GCGGCTTCTA CGCGAATAAC
CAGTTCGAGC GCTACACGCA GGCGGTGCAG CCGGGCGCGG GCCGGCAGAT CGAGTTGTCG
ACCGATGTGC GCGTGGCCAG CGCGGAGGCG TCGTACCTGC AGCGCGGCCA GGGTTTCACG
CGCAACGCCA CGCTGGGCTT CTACAAGGGC TTCGACGGGC TCGGGGCAAG CCGCCAGAAC
AACATCAACG ACCTGAGCTT CTTCCGCACC CGGTTGCTCG TGTCGCAGGC CAACGACCTG
CCCTACGGAT TTGGCACATC GATTTCCGCG GCAGGCCAGT ACAGCGGCAA CCGATTGGCA
TCGAGCGAGC AGATCAGCTT CGGCGGCCGC TTCTTCGGCC TGGGCTATCC CGCCGGCGAA
GTGGCTGGAG ACAAGGGCTG GGGGGCTTCC GCCGAAATCA ACCGGATGTT CGCGGTGGAC
TACACCTACC TGAAGACGCT GCAGCCATTC ATCGTCACCG ACTACGCGCG CGTGTTCTCC
AACAGCGTGT CGCTGTCGCA CCGGACGCTG CAATCGGTCG CCATCGGCCT GCGGTTCTCC
GACCGTCGCT ACTACACGAT GGATATCTCG GTGGCGCAGC CCGTGGGCGA CAAGCCGACC
AACGCGAGCC ATCGTTCGCC GCGTTTCAAC CTGCTCTGGT CGTACCAGTT CGACTGA
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| Protein sequence | MRTRKRVAAL LIGIGAIHSG LSHAERSPVQ GDPTQTLPTI APSKPAQSNV TVQVERPDAA
MQNLLASRLT PKHFKIEGAK TLPFEQIAAK FSPLANREIS VAELLQAAES VTQMYKDAGY
PLSFAFVPAQ SFENGDVLIT VVEGYVANVT VRGKPGPAEG RLRKIAQQLM RDRPLRQESF
EHYVNVLSQQ PGMQINATVQ PPTTTDGACE MVLEAKRKPF TFGTGVEWMS PGLRAIATAT
TNSLTPLGEQ LSFTTLFPKG HNDEEYYALN YAQPIGTEGM LAKVTASHYR GVPENTSLAP
IGFESRYVND SKRLGGTLSY PVILNNRHAL TLTGGFYANN QFERYTQAVQ PGAGRQIELS
TDVRVASAEA SYLQRGQGFT RNATLGFYKG FDGLGASRQN NINDLSFFRT RLLVSQANDL
PYGFGTSISA AGQYSGNRLA SSEQISFGGR FFGLGYPAGE VAGDKGWGAS AEINRMFAVD
YTYLKTLQPF IVTDYARVFS NSVSLSHRTL QSVAIGLRFS DRRYYTMDIS VAQPVGDKPT
NASHRSPRFN LLWSYQFD
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