Gene Rmet_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3645 
Symbol 
ID4040597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp178632 
End bp179342 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID637979068 
Productcarboxymethylenebutenolidase (dienelactone) hydrolase (DLH) 
Protein accessionYP_585786 
Protein GI94312577 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA ATAGCCGCTG GATTCGTATC GATACCCCCG ATGGCAGCTT CGACGCCTAT 
CTGAGCCTGC CGCCAGCAGG CAAGCAGCCG GGCAACCCGG GCATCGTGCT GATCCAGGAG
ATCTTCGGCG TCAACGAACA CATCCGCTCC GTGGCGGACC AGTACGCGGC CGACGGCTAC
GTGGTGCTGG CGCCGGACGT GTTCTGGCGC ACGGCGCCGC GCGTGGAACT TGGCTACTCG
GGCAAGGACT GGGAAGAGGC CATGAAGCTG CGCCAGGCCG TGAACCTGGA GGAGGCCGTA
TCCGACATCG GTGCGACGGC CAAGGCGCTG CGCGCGGAAA TCGGCGCCAG CGGTAAGGTG
GCGGCAGTGG GTTACTGTTT TGGCGGGCTG CTGTCGTACA TGGCGGCCGC GCGTGGCATG
GTCGATGCGG CGGTGCCGTA CTACGGCGGC GGTATCCAGA ACAACCTCAA GGAAGCAGAA
GCGCTCAACG TCCCGGTGCA GTTCCACTAT GGCGCGCTCG ACGCCCACAT CAAGCCCGAG
GACGTCGAAC GTGTGCGTCA GGCTGTGGCG GGCAAGCGCG GTGTCGAGGT CTTCGTCTAT
GACCAGGCCG ACCACGGCTT CAACTGCTGG GCGCGTGGCT CGTACCACCA GCGTTCGGCG
GCGCTCGCGC ATGGCCGCGC GCTGACGTTC CTGACTAACG CGCTGTCCTG A
 
Protein sequence
MTTNSRWIRI DTPDGSFDAY LSLPPAGKQP GNPGIVLIQE IFGVNEHIRS VADQYAADGY 
VVLAPDVFWR TAPRVELGYS GKDWEEAMKL RQAVNLEEAV SDIGATAKAL RAEIGASGKV
AAVGYCFGGL LSYMAAARGM VDAAVPYYGG GIQNNLKEAE ALNVPVQFHY GALDAHIKPE
DVERVRQAVA GKRGVEVFVY DQADHGFNCW ARGSYHQRSA ALAHGRALTF LTNALS