Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3644 |
Symbol | |
ID | 4040596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 177816 |
End bp | 178556 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637979067 |
Product | surface antigen precursor |
Protein accession | YP_585785 |
Protein GI | 94312576 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCC CGTTCCGTCC GGTTGTGTTG GCCGCGCTCG CCGCGAGCGC CCTGGCTGGC TGCGCCGCGC CATATGGCGG CTATGGCGAT GGCTACGGGT CGGGCTATGG CGGCTCCTAC GGCTCGTCCG GCTCCTACGG CAGCACCGCA TACGGTGGCG CCACGTATGG CAACGCTGGC TATGGTGGCA GCGGCACGCA GGTCAGCGGT GGCTACCCCA CCTATCCGCA GCAGCAAGGC TACCCTCAAC AGCAGGGATA TCCTCAGCAG CAAGGCTATC CCCAGCAGCA GGCCTACCCG CAACAACAGA CCTATGACCA GTACGCCTAC CCGTCGCAGC CTTCCGCGCC GCAGGGTGGC AACTACGACA GCGGCTATAA CAACGGCTAC AACGACCAGT ACGCCGTGCG TTATGGATGG GTGGAGTCGA TCGAGCAACT GGCCGGCCAG CCGGCCGACA CGAGCGGTGC CGGCGCCGTG ATCGGCGGTG TGGTGGGTGG TCTGCTGGGT CACCAGGTGG GCGGCGGCCG CGGGAATACC GTCGCAACGA TCGGTGGCGC GGTGGCCGGC GCGCTGGCCG GCAATGAAGT GGAGAAGCGC TCCGGCACCA CGCCGGCGGC TTTCCGCGTG CGCGTGCGCA CCAACGACAA CGTCTACGTG ACCGTGACGC AGAACAGCCC CTACAACCTG CGCACGGGCG ATCGCGTCAA GATTCAGAAC GGTGTGGCGA TGCCGTATTG A
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Protein sequence | MSFPFRPVVL AALAASALAG CAAPYGGYGD GYGSGYGGSY GSSGSYGSTA YGGATYGNAG YGGSGTQVSG GYPTYPQQQG YPQQQGYPQQ QGYPQQQAYP QQQTYDQYAY PSQPSAPQGG NYDSGYNNGY NDQYAVRYGW VESIEQLAGQ PADTSGAGAV IGGVVGGLLG HQVGGGRGNT VATIGGAVAG ALAGNEVEKR SGTTPAAFRV RVRTNDNVYV TVTQNSPYNL RTGDRVKIQN GVAMPY
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