Gene Rmet_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3644 
Symbol 
ID4040596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp177816 
End bp178556 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID637979067 
Productsurface antigen precursor 
Protein accessionYP_585785 
Protein GI94312576 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCC CGTTCCGTCC GGTTGTGTTG GCCGCGCTCG CCGCGAGCGC CCTGGCTGGC 
TGCGCCGCGC CATATGGCGG CTATGGCGAT GGCTACGGGT CGGGCTATGG CGGCTCCTAC
GGCTCGTCCG GCTCCTACGG CAGCACCGCA TACGGTGGCG CCACGTATGG CAACGCTGGC
TATGGTGGCA GCGGCACGCA GGTCAGCGGT GGCTACCCCA CCTATCCGCA GCAGCAAGGC
TACCCTCAAC AGCAGGGATA TCCTCAGCAG CAAGGCTATC CCCAGCAGCA GGCCTACCCG
CAACAACAGA CCTATGACCA GTACGCCTAC CCGTCGCAGC CTTCCGCGCC GCAGGGTGGC
AACTACGACA GCGGCTATAA CAACGGCTAC AACGACCAGT ACGCCGTGCG TTATGGATGG
GTGGAGTCGA TCGAGCAACT GGCCGGCCAG CCGGCCGACA CGAGCGGTGC CGGCGCCGTG
ATCGGCGGTG TGGTGGGTGG TCTGCTGGGT CACCAGGTGG GCGGCGGCCG CGGGAATACC
GTCGCAACGA TCGGTGGCGC GGTGGCCGGC GCGCTGGCCG GCAATGAAGT GGAGAAGCGC
TCCGGCACCA CGCCGGCGGC TTTCCGCGTG CGCGTGCGCA CCAACGACAA CGTCTACGTG
ACCGTGACGC AGAACAGCCC CTACAACCTG CGCACGGGCG ATCGCGTCAA GATTCAGAAC
GGTGTGGCGA TGCCGTATTG A
 
Protein sequence
MSFPFRPVVL AALAASALAG CAAPYGGYGD GYGSGYGGSY GSSGSYGSTA YGGATYGNAG 
YGGSGTQVSG GYPTYPQQQG YPQQQGYPQQ QGYPQQQAYP QQQTYDQYAY PSQPSAPQGG
NYDSGYNNGY NDQYAVRYGW VESIEQLAGQ PADTSGAGAV IGGVVGGLLG HQVGGGRGNT
VATIGGAVAG ALAGNEVEKR SGTTPAAFRV RVRTNDNVYV TVTQNSPYNL RTGDRVKIQN
GVAMPY