| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3633 |
|---|
| Symbol | |
|---|
| ID | 4040585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 169239 |
|---|
| End bp | 169955 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637979056 |
|---|
| Product | transcriptional activator, TenA family |
|---|
| Protein accession | YP_585774 |
|---|
| Protein GI | 94312565 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC TGATGAACCG TGAAGAATTC CGCACCGCGC TCGAGAACGC GATCAAGGGC
AAGAGCGCCA ACCAGGCCCC CTTCAGCAAG GCCTGGGCCA GCGGCGAACT GAGCCGCGAG
CATCTGGCGC GCTGGGCAGA GAACCACTAT CACTATGTCG GCCCGTTCGC GGACTACCTG
GGCTACATCT ACGCCCGCAC GCCCGATCAC ATGACCGAGG CCAAGGACTT CCTGCTGGCC
AATATGTACG AGGAAGAGAT CGGCGGCGAC CGCCATACCG ATCTGCTGAT CCGCTTTGCC
GAAGCCTGCG GCACCACGCG CGAACGTGTG GTGAGCCCGG ACAACATGTC GCCGACCACG
CGCGGCCTGC AAAGCTGGTG CTACGCCGTG GCCATGCGCG AAGATCCGGT GGTGGCCGTG
GCTGGTCTGG TGGTGGGCCT GGAATCGCAA GTGCCGTCGA TCTATCGCAA GCAAACGCCG
ACGCTGCGCG AGAAGTATGG CTTCACCGAC GAGGAAGTCG AGTTCTTCGA CCTCCACATC
GTGTCCGACG AGATCCACGG TGAGCGCGGC TACCAGATCG TGCTGGAGCA CGCCAACACG
CCCGAGTTGC AGCAACGCTG CCTGAAGATC TGCGAAATCG GCGCCCAGAT GCGCCTGCTG
TACACGACGG CGCTCTATTA CGACTACGTC GACACCAAGG CACAAGCCGC AGCCTGA
|
|---|
| Protein sequence | MAELMNREEF RTALENAIKG KSANQAPFSK AWASGELSRE HLARWAENHY HYVGPFADYL
GYIYARTPDH MTEAKDFLLA NMYEEEIGGD RHTDLLIRFA EACGTTRERV VSPDNMSPTT
RGLQSWCYAV AMREDPVVAV AGLVVGLESQ VPSIYRKQTP TLREKYGFTD EEVEFFDLHI
VSDEIHGERG YQIVLEHANT PELQQRCLKI CEIGAQMRLL YTTALYYDYV DTKAQAAA
|
|---|
| |