| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3620 |
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| Symbol | degP |
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| ID | 4040510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 155450 |
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| End bp | 156913 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979043 |
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| Product | multifunctional serine-type endopeptidase /oxidoreductase |
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| Protein accession | YP_585761 |
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| Protein GI | 94312552 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTC AGACTCTCGC CCGCTCTGCT GTCGGTGTCG CTGCCTTGGC TGCCCTTGCC
GGCGGCTACG CGTATCTGCA GAAGGATGCG ATCACCCCGG GATACGCCGC ACAGACCCCG
GTCACCGCAA GCGCAGGACC GATTGCAGTC GCCACGCCAA CGGATTTCTC GAGCATCGTG
GATCAATATG GCCCAGCCGT CGTGAACATC AGCGTGACCG CGCGCGCCCA GCGTACTTCG
GCACAAGTGC CGCAGGGCGT CGATCCGGAT GACCCGCTGT TCCAGTTCTT CAAGCGATTC
GGCCCGCAGT TCCAGGGGCC GCAGAATGCG CAGCCGCAGC TGGTGCGTGG ACTAGGCTCG
GGATTCATCG TTAGCCAGGA CGGTCTGATC CTGACGAATG CGCACGTGGT CGACAACGCT
ACCGAAGTCA CGGTGAAGCT CACAGACCGC CGCGAGTTCA AGGCCAAGGT GTTAGGCAGC
GATCCGCAGA CTGACATCGC GGTGATTCGC ATCGATGCAA AGAATCTCCC CACGGTCCGG
CTGGGCGACC CGTCGAAAAC CCGCGTTGGC GAGCCGGTGC TCGCCATTGG GTCCCCGTAC
GGCTTCGAGA ACACGGTCAC TGCCGGTATC GTCAGTGCCA AATCGCGTTC GCTGCCCGAT
GACACCTACG TGCCGTTCAT CCAGACCGAC GTTGCGGTGA ATCCCGGCAA TTCCGGCGGT
CCGCTGTTTA ATCAGCGCGG CGAAGTGATC GGCATCAACT CGCAGATCTA CAGCCAGACT
GGTGGCTATC AGGGCCTCTC GTTTGCCATC CCGATCAACG TAGCGACCAA GGTCGAGGAG
CAACTCGTAG CCCATGGCAA GGTCACGCGC GGCCGTCTCG GTATCTCGGT TCAGGAAGTG
AACCAGGCGC TTGCGCAGTC GTTCAACTTG CCGAAGCCTG CGGGTGCGCT GGTTAATTCG
GTGGAACCGG ACAGCCCCGC GGCGAAAGGT GGTGTGAAGG CTGGCGACGT GATCGTGCAG
CTCGGCGATG ACGTCATCGA TCATTCCGGT GATCTGCCCG AGCATGTGGC CGACCTCAAG
CCGGGCACTG AGACGAAGCT CAAGGTCATC CGCAAGGGGC AACCGATGAC GCTGACGGTC
CAGGTCGGGG CGGTGAAGGA AGACGCCCTG GCTCAGAAGG GTAACGGTGG TCAGGACGGC
GGACGCCTGG GTCTTGCGGT TCGTCAGCTG ACGCCTGCGG AGAAGCGCGA CAGTGGCATA
GACGGCGGCC TCGTGGTCGA AGACGTGACG GGACCCGCTG CGCGAGTAGG TATCCAGCCG
GGCGATGTCA TTCTCTCACT GAACGGCACG CCGATCTCTT CCGCCGAGCA ACTGCGAACG
CTGGTGTCCA AGTCTGGCAA GCAGGTGGCA CTGCTGGTAC AGCGTGACGA TGCGCGGATT
TTCATCCCGC TCGACCTCGG CTGA
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| Protein sequence | MIRQTLARSA VGVAALAALA GGYAYLQKDA ITPGYAAQTP VTASAGPIAV ATPTDFSSIV
DQYGPAVVNI SVTARAQRTS AQVPQGVDPD DPLFQFFKRF GPQFQGPQNA QPQLVRGLGS
GFIVSQDGLI LTNAHVVDNA TEVTVKLTDR REFKAKVLGS DPQTDIAVIR IDAKNLPTVR
LGDPSKTRVG EPVLAIGSPY GFENTVTAGI VSAKSRSLPD DTYVPFIQTD VAVNPGNSGG
PLFNQRGEVI GINSQIYSQT GGYQGLSFAI PINVATKVEE QLVAHGKVTR GRLGISVQEV
NQALAQSFNL PKPAGALVNS VEPDSPAAKG GVKAGDVIVQ LGDDVIDHSG DLPEHVADLK
PGTETKLKVI RKGQPMTLTV QVGAVKEDAL AQKGNGGQDG GRLGLAVRQL TPAEKRDSGI
DGGLVVEDVT GPAARVGIQP GDVILSLNGT PISSAEQLRT LVSKSGKQVA LLVQRDDARI
FIPLDLG
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