| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3603 |
|---|
| Symbol | |
|---|
| ID | 4040452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3915541 |
|---|
| End bp | 3916479 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637979021 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_585744 |
|---|
| Protein GI | 94312534 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATCC GTTGGCTCGA AGATTTCGTC TGCCTGGCCC AGGCCGGGAG TCTCGCGCGT
GCCGCCGAGT TGCGCAACGT CACGCCGCCC GCATTTGGCC GGCGGATGCA GGCGCTCGAA
GTCTGGGCCG GCGCGCCACT GATCGATCGC AGCACGTTTC CGGTGCGGCT GACCGCCGAG
GGCCGCCAGT TCCTGGAGGC CGCGCAGACG GCGCTGCGCA CGCTGGAGGA CGCACGCCTG
TCGCTGCGGG CGGCGCATCG CGCGGACGCC AGCACGCTGA CCATCGCCAC CGGCAAGACG
CTCGCGCGTT CGATGGTGCC AGCATGGCTG GCCGGCCTGC GCGAGGCACT GCGCGACGAC
CCGGCCGGCG CCGGCTTTCG CACACGGCTA TCGACCCATG CCACGCACGA TGCGCTGGCC
ATGTTCACCG AGGGCGATGC TGACTTTCTG CTTTGCTACA GTCCGCACGA TATGCCCGTG
ATGCTGGACG ACGCGCGCTA TGTGTTCCAT CCCGTGGGCG TGGAGCGCAT GGTCTGCGTG
GCGGCTGCCG ATGCGCGTGG TGGCCCCGCC TTCCGGCTGC AACGACCGAA GTCGGGCACG
CGCCCCGCGC CGGTGCCGAT GATTGCCTAT GCGGAGACGC TGACGATGGG CCGCATGGTC
AACCAGGAGA TTGCCCGCCG CAAGCTGGCA AGCTGGCTCG ACGTGATCGC CGTCAGTGAC
TTCGCCGAGT CGGTACACGA GATGGTGCGG CAGAAGATGG GCCTGGCCTG GCTGCCGGCG
CGTCTGATTG CCGACGATCT CCATTCGGGA CGCCTGGTGC GTGCCGATCT TCAGGGCGGC
GACTCCGCCG ACCTCGCGCT TGATATCCGC CTGTACCGCC CGCGCGCGCA AATGCGCCCG
TTGGCCGAGG CGTTCTGGCG GGCCGCGGCG GCAGCCTGA
|
|---|
| Protein sequence | MHIRWLEDFV CLAQAGSLAR AAELRNVTPP AFGRRMQALE VWAGAPLIDR STFPVRLTAE
GRQFLEAAQT ALRTLEDARL SLRAAHRADA STLTIATGKT LARSMVPAWL AGLREALRDD
PAGAGFRTRL STHATHDALA MFTEGDADFL LCYSPHDMPV MLDDARYVFH PVGVERMVCV
AAADARGGPA FRLQRPKSGT RPAPVPMIAY AETLTMGRMV NQEIARRKLA SWLDVIAVSD
FAESVHEMVR QKMGLAWLPA RLIADDLHSG RLVRADLQGG DSADLALDIR LYRPRAQMRP
LAEAFWRAAA AA
|
|---|
| |