| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3588 |
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| Symbol | |
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| ID | 4040437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3895613 |
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| End bp | 3896860 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979006 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_585729 |
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| Protein GI | 94312519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGT CCCAACAAAT CCGTAGTGTT GCCGCCGCTG TGGCGGTACT GGCGTTGTCC
GCCTGCGGCC AGAAAGCCCC GCAGGGCGGC GCGATGCCGC CTCCGGAAGT GGGTGTCGTG
ACCGTCACGC CGTCCGCAGT TGCCGTCGTC AATGAATTGC CGGGTCGTCT CGAGGGTGTT
CGCACCGCCG AGGTGCGTGC CCGCGTGGAA GGTATCGTCC TGTCGCGCAA CTACACCGAA
GGCGGTGAAG TGAAGGCCGG TCAGGTGCTG TTCCGCATCG ATCCCGCCCC GTATCAGGCG
CAACTGGCTT CGGCCAAGGC CCAGCTCGAG CGTGCCGAGG CCAATGCCGT GTCCGCGCGC
CAGAAGGCTG AGCGCTACAA GCCGCTGGTG GCTGCCAACG CCGTCAGCAA GCAGGAATAC
GACGAGGCGG TTGCCGCCGC CGGTCAGGCC AATGCCGATA TCGCCGCCGC CAAGGCGGCC
GTGACGACCG CGCAGATCAA TCTGGGCTAC ACCACCGTCA CCGCGCCGAT CTCCGGCCGC
GTCGGCCGTG CGCTGGTCAC GGAAGGCGCG CTGGTCGGCA AGGGCGAAGC CACCAAGCTG
ACCACCGTCG AACAAGTCGA GCCGATCTGG GTGACCTTCA CGCAACCCGC GTCGGAAGTG
GCGCGCCTGC GTCGCGCCAT TGAGGCCGGC CAGGTCAAGG GTGTGAACGG TGGCGCGCGC
GTGCACCTGT ACCCGGAAGC CGGCGACAAG GAATACGGCA TGACCGGCAA GCTGCTGTTC
TCGGACATGA CCGTGGACCC GACCACGGGT TCGATCACGC TGCGTGCCGA GTTCCCGAAC
CCGAAGCGTG AACTGCTGTC GGGCACCTTC GTGCGCGTCA AGATCGAACA GGGTGTGGAC
GAAAAGGCGC TGACCGTGCC GCAGCGCGCG CTGATCCGTA GCGCACAGGG CGCGAGCGTG
CTGGTGGTGG GCGATGACGG CAAGGTAGCC GCGGTGCCGG TCAAGGCGCC GCAGGCGATC
GGCGATCGCT GGGTGGTGAC CGAAGGCCTC AAGGGTGGCG AAAAGGTCAT CGTCGAGGGC
CTGCAAAAGG TTCGCCCGGG CGCGCCTGCC AAGGCCGTGC CGTTCCAGAA TCCGCAGACC
GCGGCTGCGC CGGCATCGGG CGCAGGTGCG CAGGGTGCTG AAGGCGGCAA GTCCGAAGCC
AGCAACGAAG CCAAGCCCGC CGAGCAGAAG CCGGCCAAGC AAGGCTGA
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| Protein sequence | MRKSQQIRSV AAAVAVLALS ACGQKAPQGG AMPPPEVGVV TVTPSAVAVV NELPGRLEGV
RTAEVRARVE GIVLSRNYTE GGEVKAGQVL FRIDPAPYQA QLASAKAQLE RAEANAVSAR
QKAERYKPLV AANAVSKQEY DEAVAAAGQA NADIAAAKAA VTTAQINLGY TTVTAPISGR
VGRALVTEGA LVGKGEATKL TTVEQVEPIW VTFTQPASEV ARLRRAIEAG QVKGVNGGAR
VHLYPEAGDK EYGMTGKLLF SDMTVDPTTG SITLRAEFPN PKRELLSGTF VRVKIEQGVD
EKALTVPQRA LIRSAQGASV LVVGDDGKVA AVPVKAPQAI GDRWVVTEGL KGGEKVIVEG
LQKVRPGAPA KAVPFQNPQT AAAPASGAGA QGAEGGKSEA SNEAKPAEQK PAKQG
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