| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3584 |
|---|
| Symbol | |
|---|
| ID | 4040433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3890851 |
|---|
| End bp | 3892338 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637979002 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_585725 |
|---|
| Protein GI | 94312515 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCCTC GCCGCCTGCG CCAGCGCGCG CGCCTGCCTG TGCGGTCCTG GTTGCGCGGC
AGCCTGCGGC GCCAGTTGCT GATCCTGCTG GTGCCGGCGC TGGCGCTCAT GATGGCGGTC
GATACGTGGT TCACCTACGG CACCCTGCGC GATGCCGCCA ACACGGCATA CGACCGCTCG
CTGTACGGCT CCGTGCTGAC CATCGACAAC GCCATCGGGA TGGCCGGCGA AAGCATCCAG
CTATCGCTGC CCGACGCAGC CATGGAGATG TTCGAGACCG CGGCGCAGAC ACACGTGTTC
TACCGCGTGT CGATGGAGCG GGCGGGCCAG ATCGAGACTG TCACCGGTTA TGACGACCTG
CCGCTGCCGG CGGGAGCGCT GCGGAACGGC CAACCGCGCT TCTACGACGC CACCTATCGC
GGCGACCGGG TCCGCATCGC GGCGATGGCC CGCCCGGTCT ATCGCCCCGA CGCGCACATG
CGCGTGATCA TCCAGGTGGC GGAGACCGCC GAGCCGCGCG CGGCGCTGAT CGGCAACGTC
TGGCGCAGTG CACTGCTGCG CGACATCGCG CTGATCATCG TCTCGGCGCT GATCCTGGTC
GGCGGCATTA CCTACGTGCT CCGCCCGCTG CAACAGGTAC GCGACGATGT GCGCGCGCGC
TCGCCCGAGG ATCTGACCCC GCTCGAATTC GACCATGTGC CGGTCGAGGT GCGCCCGCTG
GTCGACGCGG TGAACCTGCA CGTGTCGCGC TCCGACGCGA TGGCCCAGGC CCAGGCCCAG
TTCATCGCCG ATGCCGCCCA TCAGCTCCGC ACGCCACTGG CCATCCTGAA GACACAGGCC
GAGTTCGCGC AGCGGCAGCT CGACACGTTC GGCGGTGAAG GCGCGGCGCA TTCAGGCGCC
GCCGAAGCCG TTGGCGGCAT CGTCAAGCAA CTGGAGCAGG CCGCGCGGAT GACCAACCAG
TTGCTGGCAC TGGCGCGCGT CAGACAGCAC GCGCCGGACG GCACCGCCCC GGCCACGGAA
GTGGAAATCA TCGACGCAAT CGGCGTGGCG GAGCAGGTGG CACTGGACTA CCTGCCACTC
GCTCGCGGAC GCCAGCAGGA TTTCGGCTGG GAACGACCGG CCGGACTGGA ACTGCCAGTG
CAGGCCGATC CCGCGCTGTT GCGCGAGGCA TTCGCCAATC TTGTCCACAA CGCCATCCAG
TACTCGGGAC GCCGCAGCCG CATCACGCTC TCCGCCACAC AGGTCGACGA CAGCGCCATG
CTCGTCGTCG AGGATGACGG CCCCGGCATT CCCGAGGCCG AACGCGAGAA GGTGTTCGCG
CGCTTCTATC GCCGGGTCGG CCACACGGAA ACAGGGTCGG GCCTCGGACT TGCCATCTCG
CGCGAGATGG CGATGCGCTG CGGCGGCACC GTGGTCTTGC GCGAAGGCGT CCAGGGACGC
GGCGTGCGCG CGGAACTCAG CTTGCCACTG GTGATGCCGA CGGCCTGA
|
|---|
| Protein sequence | MWPRRLRQRA RLPVRSWLRG SLRRQLLILL VPALALMMAV DTWFTYGTLR DAANTAYDRS
LYGSVLTIDN AIGMAGESIQ LSLPDAAMEM FETAAQTHVF YRVSMERAGQ IETVTGYDDL
PLPAGALRNG QPRFYDATYR GDRVRIAAMA RPVYRPDAHM RVIIQVAETA EPRAALIGNV
WRSALLRDIA LIIVSALILV GGITYVLRPL QQVRDDVRAR SPEDLTPLEF DHVPVEVRPL
VDAVNLHVSR SDAMAQAQAQ FIADAAHQLR TPLAILKTQA EFAQRQLDTF GGEGAAHSGA
AEAVGGIVKQ LEQAARMTNQ LLALARVRQH APDGTAPATE VEIIDAIGVA EQVALDYLPL
ARGRQQDFGW ERPAGLELPV QADPALLREA FANLVHNAIQ YSGRRSRITL SATQVDDSAM
LVVEDDGPGI PEAEREKVFA RFYRRVGHTE TGSGLGLAIS REMAMRCGGT VVLREGVQGR
GVRAELSLPL VMPTA
|
|---|
| |