| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3582 |
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| Symbol | |
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| ID | 4040431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3886696 |
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| End bp | 3889905 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979000 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_585723 |
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| Protein GI | 94312513 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT CCGAGCTTTG TATCCGCCGG CCCGTCATGA CGGTGCTGTT GTGCCTGGCC
GTCATCGTGA CCGGTATCGT GCTGTATCCG ACGATTCCGA TTGCGGCGTT GCCCAGTTTC
AATTCGCCCG TGATCCAGGT CACGGCCACG CTGCCGGGGG CGAGCCCGGA GACGATGGCG
GCGTCCGTCG CCACGCAGCT CGAGAAGCAG TTCGCCACGA TTCCGGGCGT CTCGGTCATC
AGCTCGTCGA ACACGCTCGG CAATTCGAGC ATCACGATCG AGTTCAACAA CGACCGCGAT
ATCGACGCCG CCGCCGTGGA CGTGCAGGCC GCGCTGTTCC GCGCGCAGCG GTCGCTGCCG
ATCGAGATGA CGCTGCCACC GTCGTATCGC AAGGTGAACC CGGCCGATGC GCCGGTGATC
CTGCTGGCGA TCAATTCGCC GTCGATGAGC CTCGGGGAGC TGAACGCGTT TGGCGATAAC
CTGATCTCGC CGACGCTGGC CACACTGCCC GGCGTCGCGC AGGTGCAGAT TTTTGGCCAG
AAGCGCTTCT CAGTGCGCGT GCGCGCCCAC CCCGACGCGC TGGCCGCGCG TGGCCTGACG
CTTGATGAGC TGGCCACCGC GCTCAATCGC GCCAATGCGA ACACGCCGGT CGGCACGCTC
GACGGCACGC GCCAGACGCT GACGATCCAG GCTAACCGCC AGATGACCAA CGCGGACGCG
TTCCGCAACA TCATCGTGGC CAGCCAGCCG AGCGGCGCCG TGGTGCGGCT GTCGGACGTG
GCGGAAGTGG AAGACAGCGT CGAGACGATC AAGACCGGCA GCTGGCTCAA CAACGAACGC
TCGATCGTGC TGGCCGTGCA GCGCCAGCCA GATGCCAACA CGGTGGCCGT GGTCGATGCG
ATCCGGAGCG CCCTGCCGCG CCTGCTGGCG CAGATGCCGG GCTCCGTCAA CGTGAACGTG
GTGAACGACC GGTCGATGTC GATCCGGGGA TCGATCCACG ATGTGCAGTT CACGCTGGCG
CTGACCGTCG CGCTGGTGGT GATGGTGATC TTCCTGTTCC TGCGCCGCGC CGCCGCGACG
CTGATTCCCA CGGTATCGCT GCCGATCTCG CTGATCGGCA CCGTGGCGCT GATGAAGGCG
TTTGGCTACA GCCTGGATAA CGTGTCGCTG CTGGCCATCA CGCTGGCCGT GGGCCTGGTG
GTGGACGACG CGATCGTGAT GCTCGAGAAC ATCGTGCGTC ATATCGAGGA AGGCGTGCCG
CCGCTCAAGG CAGCGCTGGT GGGCTCGCGC GAAATGGGCT TCACGATCCT GTCGATTTCG
ATCTCGCTGG TGGCCGTGTT CATCCCGATT TTCTTTATGC CGGGTGTGAT TGGCCTGCTG
TTCCACGAAT TCGCCGCGGT GGTGTCGCTG TCTATTCTCG TCTCGGCGCT CGTGTCGCTG
ACACTGATCC CGATGCTGTG CGCGCGCTTC CTGTCTGCCG AGAACGTGCC GGTGGACGAA
TCACAGCACA TGTATGGGGA AGCGACGGGC GATCACGCCG CGGGCGCGCC CGTGCATCGC
GTGGAGCAGA AGCAAACGAT CGGGATGCGT TCCACGCAGT GGTTCGAAGA CCTGTTCGAA
TGGACGCTCC GCAAGTACGC GAGCGGACTG GACTGGTGCC TGGCGCACCG CCGCGTGGTG
CTTGCCGCAG CCGGCCTGAC GTTCGTGCTG ACCGCTGTGC TGTTCGTGAA GATCCCGAAG
GGCTTCTTCC CCGAGGAAGA CATCGGCCAG ATCCAGGTCA ACGCAGAAGG CCCGCAGGAC
ATCTCGTTCG ACGCGATGTC CGATCGCCTG CGCGACGCCG CCGAACGTAT CCGCGCGAAT
CCGGCCGTGA AGAGCGTGGT GGCGTCGATC GGCGGTGGCC CGTCGCCAGC CATCAACACG
GGCCGGATGT TCGTCGAGCT GAAGCCGCTC GGGGAGCGCC CGAAGATGCC GCAGGTGGTG
GAGTCGCTGC GCAAGGATGT TGCCGGGGTG CCCGGGCTGG CGGTCTACTT CTCGCCGGTG
CAGAACCTGC GTCTCGGCGG GCGTCAGAGC AAGAGCCGCT ACCAGTACAC GCTGCAGAGC
GTGAAGCCGG GGCAGTTGCA GGAGTTCAGC GACAAGCTCA TGGCCAAGAT GCGCACCGAG
CCGATCTTCC GTGACGTGAC CAGCGATTCG CAGCAGTCGG GTCTCGAGGC GCAACTGACA
ATCGACCGCG ACAAGGCCAA TGCGCTCGGC GTGCAGATGC AGGACGTGCG CACGGCGCTG
TACACCGCGT TTGGCGAGCG TCAGGTGTCG ACGATCTACA CGCCGATCGA CAACTACTAC
GTGATCCTGA CCGCGGCCGA TATCGACCGC GCGGATGAGA CGGCGTTCTC CAAGCTCTAC
GTGCGCAGCC GGACGGGCCA GATGGTGCCG GTGTCGGCGT TCGCCACGAC CGAGCGCCGC
GTGGGACCGA TCGCGGTGAA CCACCAGGGC CAATTGCCAT CGGTCACGGT GTCGTTCAAC
CTCGCGCCGG GCGCCGCGCT TGGCGATGCG TCGAAGCTGA TCGACCGCTA TCGCGATGAG
ATCGCGATGC CGACATCGAT ATTCACGAGC TGGGGTGGTG ATGCTGCGGT GTTCCAGTCG
TCACAGGCCA CGCAGGTGGT GCTGCTGGTG GCGGCGATCG CGGTGATCTA CACGCTGCTG
GGTGTGCTCT ACGAGAGCTA CATCCACCCG CTGACGATTC TGGCCGGCCT GCCTTCCGCG
GCCGTTGGCG CGTTGCTGAC GCTGTTCCTG TTCAACGTGG AGCTGTCGCT GATCGCGACG
ATCGGTGTGC TGATGCTGAT CGGTATCGTC AAGAAGAACG CGATCATGAT GATCGACTTC
GCGCTGGCGG CGCAGCGTGA GCAGGGCATG GCGCCCGCGA AGGCGATTCG GCAGGCGTGC
CTGCTGCGCT TCCGCCCGAT CATGATGACC ACGTTCGCGG CCGTGATGGG CGCCCTGCCG
CTGGCACTGG GCCTGGGCGC GGGCGCGGAA CTGCGCCAGC CGCTCGGCTT GGCCGTGGTG
GGTGGTTTGC TGTTCTCGCA AGTGATCACG CTGTTCATCA CGCCGGTGAT CTACCTCGCG
CTCGATCGCT ACTCTGGTAC CGGCCCGTTG CAGATCGATT CGGAAGGCAA TCCGCTGGAC
GAGCAGCAGC CGGCAACGGT GGCGCACTGA
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| Protein sequence | MTLSELCIRR PVMTVLLCLA VIVTGIVLYP TIPIAALPSF NSPVIQVTAT LPGASPETMA
ASVATQLEKQ FATIPGVSVI SSSNTLGNSS ITIEFNNDRD IDAAAVDVQA ALFRAQRSLP
IEMTLPPSYR KVNPADAPVI LLAINSPSMS LGELNAFGDN LISPTLATLP GVAQVQIFGQ
KRFSVRVRAH PDALAARGLT LDELATALNR ANANTPVGTL DGTRQTLTIQ ANRQMTNADA
FRNIIVASQP SGAVVRLSDV AEVEDSVETI KTGSWLNNER SIVLAVQRQP DANTVAVVDA
IRSALPRLLA QMPGSVNVNV VNDRSMSIRG SIHDVQFTLA LTVALVVMVI FLFLRRAAAT
LIPTVSLPIS LIGTVALMKA FGYSLDNVSL LAITLAVGLV VDDAIVMLEN IVRHIEEGVP
PLKAALVGSR EMGFTILSIS ISLVAVFIPI FFMPGVIGLL FHEFAAVVSL SILVSALVSL
TLIPMLCARF LSAENVPVDE SQHMYGEATG DHAAGAPVHR VEQKQTIGMR STQWFEDLFE
WTLRKYASGL DWCLAHRRVV LAAAGLTFVL TAVLFVKIPK GFFPEEDIGQ IQVNAEGPQD
ISFDAMSDRL RDAAERIRAN PAVKSVVASI GGGPSPAINT GRMFVELKPL GERPKMPQVV
ESLRKDVAGV PGLAVYFSPV QNLRLGGRQS KSRYQYTLQS VKPGQLQEFS DKLMAKMRTE
PIFRDVTSDS QQSGLEAQLT IDRDKANALG VQMQDVRTAL YTAFGERQVS TIYTPIDNYY
VILTAADIDR ADETAFSKLY VRSRTGQMVP VSAFATTERR VGPIAVNHQG QLPSVTVSFN
LAPGAALGDA SKLIDRYRDE IAMPTSIFTS WGGDAAVFQS SQATQVVLLV AAIAVIYTLL
GVLYESYIHP LTILAGLPSA AVGALLTLFL FNVELSLIAT IGVLMLIGIV KKNAIMMIDF
ALAAQREQGM APAKAIRQAC LLRFRPIMMT TFAAVMGALP LALGLGAGAE LRQPLGLAVV
GGLLFSQVIT LFITPVIYLA LDRYSGTGPL QIDSEGNPLD EQQPATVAH
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