| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3577 |
|---|
| Symbol | |
|---|
| ID | 4040426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3880395 |
|---|
| End bp | 3882251 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978995 |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_585718 |
|---|
| Protein GI | 94312508 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CCACAATGCA AGGCACTCCG GCACTGAACG TGCCGGCTTG GGTCAAGAAC
CAGAAACTGG TCGCCTGGGT TGCCGACATC GCCGCATTGA CCAAGCCCGA CCAGGTCTAC
TGGTGCGATG GCTCGCAGGA AGAATATGAC CGCCTGTGCG AGCAGATGGT CGCCGCCGGC
ACGATGCGCC GCCTGAACCC GGCCAAGCGC AAGAACTCGT TCCTGGCCCT GTCGGATCCC
TCCGATGTGG CACGTGTCGA AGACCGCACT TTCATCTGCT CGCAGAAGCA GGAAGACGCC
GGCCCGACCA ACAACTGGAC CGCACCGGCC GAAATGCGCC AGACGCTGAA CGGCCTGTTC
GACGGCTGCA TGCGTGGCCG CACCCTGTAC GTGGTGCCGT TCTCGATGGG CCCGCTGGGT
TCGCCGATCG CCCACATCGG CGTCGAGCTG TCCGATTCGC CGTACGTCGC CGTGAACATG
CGCATCATGA CCCGCATGGG CCGCGCCGTG TACGACGTGC TGGGTGCCGA CGGCGAGTTC
GTGCCGTGCG TGCATACCGT GGGCAAGCCT CTGGCCGCCG GCGAGAAGGA CGTGGCATGG
CCGTGCAATC CGACCAAGTA CATCGTGCAC TTCCCCGAGA CGCGCGAAAT CTGGTCGTTC
GGTTCGGGCT ACGGCGGCAA TGCGCTGCTG GGCAAGAAGT GCTTCGCACT GCGGATCGCC
TCGACGATGG GCCGCGACGA AGGCTGGCTG GCCGAGCACA TGCTGATCCT CGGCGTGACC
TCGCCGGAAG GCAAGAAGTA CCACGTGGCT GCCGCGTTCC CGTCGGCCTG CGGCAAGACC
AACTTCGCCA TGCTGATCCC GCCCAAGGGC TTCGAGGGCT GGAAGGTCAC GACGATCGGT
GACGACATCG CCTGGATCAA GCCAGGCAAG GACGGCCGCC TGTACGCCAT CAACCCGGAA
GCCGGCTACT TCGGCGTGGC CCCGGGCACG AGCGAGAAGA CCAACTTCAA CGCGATGGCG
ACGCTCAAGG AAAACGTCAT CTTCACCAAC GTGGCACTGA CCGACGACGG CGACGTGTGG
TGGGAAGGCA TGACGAAGGA AGCCCCGGCG CACCTGATCG ACTGGCAGGG CAAGGACTGG
ACGCCCGAGA TCGCCAAGTC GACCGGCGCC AAGGCTGCCC ACCCGAACGC CCGCTTCACC
GCGCCGGCCT CGCAATGCCC GTCGATCGAC GACAACTGGG ACAACCCGGC TGGCGTGGCC
ATCGATGCAT TCATCTTCGG CGGCCGCCGC AGCTCCACCG TGCCACTGGT GACCGAAGCC
CGCAACTGGA CCGAAGGCGT CTACATGGCC GCCACGATGG GTTCGGAAAC CACCGCCGCC
GCTGCCGGCC AGCAAGGCGT GGTCCGCCGC GATCCGTTCG CGATGCTGCC GTTCTGCGGC
TACAACATGA GCGACTACTT CGGCCACTGG CTGGCGTTGG GCAAGAAGCT CGAAGCCGCC
GGTGCCAAGC TGCCGCGCAT CTACTGCGTG AACTGGTTCC GCAAGGACGC CGACGGCAAC
TTCGTGTGGC CGGGCTTTGG CGAGAACATG CGCGTGCTGT CGTGGATGAT CGACCGCGTG
GAAGGCCGTG GCGAAGGCGC CGAGCACGTG TTCGGCACGT CGCCGCGCTA CACGGACCTG
AACTGGAACG GCCTGGCCTT CACCGCCGAG CAATTCACCC AGGTCACGTC GATCGACCGT
GACGCATGGC AAAAGGAACT GGCGCTGCAC GACGAACTGT TCACGCAGCT CAAGCACAAC
CTGCCGCAAG CGCTGGCGGA AACCAAGGAC GCACTGGCCA AGCGCCTGTC GGCCTGA
|
|---|
| Protein sequence | MNHPTMQGTP ALNVPAWVKN QKLVAWVADI AALTKPDQVY WCDGSQEEYD RLCEQMVAAG
TMRRLNPAKR KNSFLALSDP SDVARVEDRT FICSQKQEDA GPTNNWTAPA EMRQTLNGLF
DGCMRGRTLY VVPFSMGPLG SPIAHIGVEL SDSPYVAVNM RIMTRMGRAV YDVLGADGEF
VPCVHTVGKP LAAGEKDVAW PCNPTKYIVH FPETREIWSF GSGYGGNALL GKKCFALRIA
STMGRDEGWL AEHMLILGVT SPEGKKYHVA AAFPSACGKT NFAMLIPPKG FEGWKVTTIG
DDIAWIKPGK DGRLYAINPE AGYFGVAPGT SEKTNFNAMA TLKENVIFTN VALTDDGDVW
WEGMTKEAPA HLIDWQGKDW TPEIAKSTGA KAAHPNARFT APASQCPSID DNWDNPAGVA
IDAFIFGGRR SSTVPLVTEA RNWTEGVYMA ATMGSETTAA AAGQQGVVRR DPFAMLPFCG
YNMSDYFGHW LALGKKLEAA GAKLPRIYCV NWFRKDADGN FVWPGFGENM RVLSWMIDRV
EGRGEGAEHV FGTSPRYTDL NWNGLAFTAE QFTQVTSIDR DAWQKELALH DELFTQLKHN
LPQALAETKD ALAKRLSA
|
|---|
| |