Gene Rmet_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3567 
Symbol 
ID4040416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3868930 
End bp3870045 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID637978985 
ProductDNA processing protein DprA, putative 
Protein accessionYP_585708 
Protein GI94312498 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGACTCGCGA TCCCGCCGAG GTCGCAGCCT GGCTGCGGCT AACGGCGACG 
CCGGGCGTCA GCGCACTGGC CGGACGACGC CTGCTGGCGA AGTTCGGCCT GCCGCAGACT
GTGCTCGCCC AGAACCTGGC AAGCCTGCGT GAAGTGGTGG ATGCCAAGGT GGCGTGTGTA
TTGAACGCGC CGCTGGATGC CGCCATGTCG GCGTTGATCG ACCGGACGGT TGCGTGGTTG
GCCGATGCCC GCCATGCCAT GGTCACGATG GCCGATGCCG GTTACCCGGC GGGCCTGCTC
GATCTGGCCG ACCCTCCCCT GCTGCTCTAT ATCAATGGAG ACCCTGCCCG TCTGGCCGGC
CCAGCGCTTG GCATGGTCGG CGCGCGCAAG GCGACAACGC AAGGCGCGCG CGATGCCCAG
GCATTTGCAT CAGCGTTTTC CAATGCCGGA TGGACAGTGG TGTCCGGCCT TGCGCTCGGC
ATCGACGCCG CAGCCCACGC CGGGGCACTT GAGGGGCCGG GCGGCACCGT GGCAGTGATC
GGGACGGGCG CCGACATCGT CTACCCGGGC AGGCATCATG CGCTGGCACA TCGGATCGTC
GACGCGGGCG GTGCCATCGT CAGCGAGTTT GCACTCGGCA CGCCCGGGTT GCCGAACCAC
TTTCCGCGTC GCAACCGTAT CATTGCGGCG CTGTCTCGCG GCGTGCTGGT GGTGGAGGCG
GCGGAGCGGT CGGGTTCGCT GATTACGGCG CGGCTGGCGT CCGAGATCGG CAGGGAGGTA
TTCGCGATGC CGGGATCGAT CCATGCGGAG CTGGCCCGAG GCTGCCACAA GCTGATCCGT
CAGGGGGCCA AGCTGGTCGA GACACCGGCC GACGTGTTCG AGGAGTTCGG CGATCCGGGC
GGGGTGGCTT CTGTCGCCCC GGTACCCGTA CCCGATTCGG CGCCAGTGCC CGGTGATCCG
TTCGGCGCCG CCCTCGCCTA TGATCCTGTC ACGTTCGATG CGTTGTGCGA GCGGTCTGGT
CTCGCGCCGC ATATGGCGGC GGCAATGCTT CTGGAGCTTG AGCTTGGGGG AACGGTCGAA
CGCATGGCCG GCAATCGTTA CCGACGTCTG GCATGA
 
Protein sequence
MTDSTRDPAE VAAWLRLTAT PGVSALAGRR LLAKFGLPQT VLAQNLASLR EVVDAKVACV 
LNAPLDAAMS ALIDRTVAWL ADARHAMVTM ADAGYPAGLL DLADPPLLLY INGDPARLAG
PALGMVGARK ATTQGARDAQ AFASAFSNAG WTVVSGLALG IDAAAHAGAL EGPGGTVAVI
GTGADIVYPG RHHALAHRIV DAGGAIVSEF ALGTPGLPNH FPRRNRIIAA LSRGVLVVEA
AERSGSLITA RLASEIGREV FAMPGSIHAE LARGCHKLIR QGAKLVETPA DVFEEFGDPG
GVASVAPVPV PDSAPVPGDP FGAALAYDPV TFDALCERSG LAPHMAAAML LELELGGTVE
RMAGNRYRRL A