Gene Rmet_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3564 
Symbolfmt 
ID4040413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3865931 
End bp3866965 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID637978982 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_585705 
Protein GI94312495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGG TGTCGTTTTC ATTGCGGAAT ATCGTCATGA CCCAAGCCCA GCCACTGCGC 
GTCGCTTTTG CGGGAACGCC GGAATTCGCG CGCGTCGCCC TTGAGGCCAT TCACGCTGCC
GGATTTCCGG TGGTCGCCGT GCTGACCCAG CCAGACCGGC CCGCCGGCCG CGGCATGCAA
TTGCAGGCCA GCCCGGTCAA ACAGTTTGCC GTCGAGGCCG GCCTGGGCCC AGTGCTGCAG
CCACGCTCGT TGCGCCGCCA GGGCAAGTAT CCGGAGGAAG CCGGCGCGGC CGTCGACACG
CTCGCGGAAA TCGCACCCGA TGTGATGGTG GTGGCCGCCT ACGGGCTGAT TCTGCCGACC
GAAGTCCTTG AGTTGCCGCG TCATGGCTGC CTGAATATCC ATGCCTCGCT GCTGCCGCGG
TGGCGCGGCG CCGCGCCGAT CCACCGCGCG ATCGAGGCGG GGGACCCGGA GACCGGCATC
ACGCTGATGC AGATGGACGA GGGGCTCGAC ACCGGCGCGA TGCTGTCGCG CGAGTCCACG
CCGATCGGCC CCCAGGACAG TACCGGCACG CTGCATGACA CACTGGCCGC GCTCGGCGGG
CGCATGATCG TGGACGCGCT GCGCCAGCTC GCCGCAGGCC AGCCGCTCAC CGCCACGCCG
CAGCCCGAAG CCGGCGTCAC CTACGCGGAA AAGATCGCTA AGGATGAGGC ACCGCTCGAC
CTGACGCGCC CGGCCATCGA ACTGGCGAAC CAGATCCGCG CCTTCAATCC GTTCCCGGGC
GCCACGGTGC AAGTCGGCGA CACCATCATC AAGTGCTGGC AGGCGCTGCC GCTGGCTGCC
GCCACGAGCC TGCCGCATCC CCCGGGTACG ATCCTGGCCG CCGACACAGC CGGCGTGATC
ATCGCCTGCG GCAATGGCAG CGCCCTGCAG GTCACCGAGC TGCAGAAGCC CGGCGGCCGG
CGCCAGCCGG CGCAACAGTT CCTGCAGGCC ATGCCGCTGC CACCGGGAAC GCGCTGCCTG
ATTGCCGGCG CCTAG
 
Protein sequence
MRPVSFSLRN IVMTQAQPLR VAFAGTPEFA RVALEAIHAA GFPVVAVLTQ PDRPAGRGMQ 
LQASPVKQFA VEAGLGPVLQ PRSLRRQGKY PEEAGAAVDT LAEIAPDVMV VAAYGLILPT
EVLELPRHGC LNIHASLLPR WRGAAPIHRA IEAGDPETGI TLMQMDEGLD TGAMLSREST
PIGPQDSTGT LHDTLAALGG RMIVDALRQL AAGQPLTATP QPEAGVTYAE KIAKDEAPLD
LTRPAIELAN QIRAFNPFPG ATVQVGDTII KCWQALPLAA ATSLPHPPGT ILAADTAGVI
IACGNGSALQ VTELQKPGGR RQPAQQFLQA MPLPPGTRCL IAGA