| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3563 |
|---|
| Symbol | |
|---|
| ID | 4040412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3864906 |
|---|
| End bp | 3865766 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637978981 |
|---|
| Product | M48 family peptidase |
|---|
| Protein accession | YP_585704 |
|---|
| Protein GI | 94312494 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACT GGGTCAAGAC CTTCATGCTG ATGGCCGCGA TCACGGCGCT GTTCGTTGTG
ATCGGCGGCA TGATCGGCGG ACGCAACGGC ATGACATTCG CCCTGCTGAT CGCGCTCGGC
ATGAACTTCT TCTCCTACTG GTTCTCGGAC AAGATGGTCC TGCGCATGTA CAACGCGCAG
GAAGTGGATG CCAGCACCGC GCCGCAGTTC TACAACATGG TGCACGAGCT TTCGCAGCGT
GCCGGCCTGC CGATGCCGCG CGTGTACCTG ATCAACGAGG ACGCGCCAAA CGCGTTTGCC
ACGGGCCGCA ATCCCGAGCA CGCGGCGGTG GCCGCCACCA CGGGCATCCT GCGGGTGCTG
TCGGACCGCG AACTGCGCGG CGTGATGGCC CACGAACTCG CGCACGTGAA GCATCGCGAC
ATCCTGACCT CGACCATCGC CGCGACGATG GCCGGCGCCA TTTCCGCGCT GGCCAATATG
GCGATGTTCT TCGGCGGGCG CGACGAGAAC GGCAACCGCT CGAATCCGAT TGCCGCCATC
GCCGTGGCGA TCCTGGCGCC GCTGGCGGCA TCATTGATCC AGATGGCGAT CTCGCGGGCC
CGCGAATTCG AGGCCGACCG CGGCGGCGCG GAGATCAGCG GAGACCCGCA GGCCCTGGCC
AGCGCGCTCG ACAAGATCCA TCGCTACGCC CAGGGCATTC CGTTCCAGGC CGCCGAGGAG
CATCCGGCCA CGGCGCAGAT GATGATCATG AATCCGCTCT CGGGCGGCGG GATCGCGAAC
CTGTTCTCGA CCCACCCCGC CACGGAGGAA CGGATCGCGC GCCTGATGCA GATGGCGCAG
ACCGGCACCT ACCCGGCCTG A
|
|---|
| Protein sequence | MFNWVKTFML MAAITALFVV IGGMIGGRNG MTFALLIALG MNFFSYWFSD KMVLRMYNAQ
EVDASTAPQF YNMVHELSQR AGLPMPRVYL INEDAPNAFA TGRNPEHAAV AATTGILRVL
SDRELRGVMA HELAHVKHRD ILTSTIAATM AGAISALANM AMFFGGRDEN GNRSNPIAAI
AVAILAPLAA SLIQMAISRA REFEADRGGA EISGDPQALA SALDKIHRYA QGIPFQAAEE
HPATAQMMIM NPLSGGGIAN LFSTHPATEE RIARLMQMAQ TGTYPA
|
|---|
| |