Gene Rmet_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3561 
Symbol 
ID4040410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3862547 
End bp3863377 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID637978979 
Productputative periplasmic ligand-binding sensor protein 
Protein accessionYP_585702 
Protein GI94312492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCA CGCCGCGCCT GTTCGACCTA CGTGTCCCCG GTCACGCGTT GCGCGAGTGC 
CCGGCAGACT CGCTGGTGAA CACACTCCGC GCATGGTGCG CGGCCACGAT GATGCTGCTG
ATGCTGATGG TGCTTGCCCC GCATGCATCG GCGCAGCTCA TCGAGACCAC CGAGGCCCGC
ATCGAGTACC AGGACGGCGG GTTCGATCTC GCCGCGTCGT TCGACTTCGA CCTGCCCCCC
GCGCTGGAAG ACGCCCTGCA CAAGGGCATC TCGCTCTATT TCGTCGTCGA CTTCCAGCTC
ACGCGCCCAC GCTGGTACTG GTTCGACGAG AAGCCGGTCA ACACCATGCG CACGGTGCGC
ATTTCCTATC AGCCGTTGAC GCGCCAGTAC CGCGTGTCGA CCGGCGGCCT GCAGTTGCCG
TTCAGCCGCC TCAAGAGCGC GCTGCAGTTC ATCCAGCAGG TACGCGGCTG GCGTGTGTTC
GAACGCAACC AGGTCAGGCT CGGCGAGACC TATCACGCCG AAACACGGAT GCGCCTGGAC
CTGTCCCAGC TACCTAAACC GTTTCAGATC AACGCCGTGA ATACGCGTGA GTGGAACCTA
TCGTCGGAGT GGAAGCGCTT CAACTACACG GTGCCGACCA ATCTCGACGC GCCGCCGCCG
CCGGCCCCGG TAGCACCGCC ACCCGTTGCG CCACCCGCAC CGCCGGCCAT GCCCGGCTCG
TCACCAACGC CCGCTTCGGC CGTCAGCGGA GAACCACGCA CGCAGTTCTC GCAAACGCTG
TCTAACGCGT TGTCCACGAA CCAACTGGTC CAGCCGGTCA GCCAGCCATG A
 
Protein sequence
MLSTPRLFDL RVPGHALREC PADSLVNTLR AWCAATMMLL MLMVLAPHAS AQLIETTEAR 
IEYQDGGFDL AASFDFDLPP ALEDALHKGI SLYFVVDFQL TRPRWYWFDE KPVNTMRTVR
ISYQPLTRQY RVSTGGLQLP FSRLKSALQF IQQVRGWRVF ERNQVRLGET YHAETRMRLD
LSQLPKPFQI NAVNTREWNL SSEWKRFNYT VPTNLDAPPP PAPVAPPPVA PPAPPAMPGS
SPTPASAVSG EPRTQFSQTL SNALSTNQLV QPVSQP