| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3560 |
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| Symbol | |
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| ID | 4040409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3860067 |
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| End bp | 3862550 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978978 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_585701 |
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| Protein GI | 94312491 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCA ATCCGTGGGA CAGCAGATTC CGACGCCTGC TCTATCGCGT CGTGGTGGGC
ATCATCGTCT TCCTGGCGTT GGTGCTGGTG GGACTGCTAG CCGGAGCCTC GGCCAATACC
GAGTTCTTCG ACCGCTATTT CACGCTGCTC TTCAAGATCA ATCTCGTCGT CGGCGCCTTG
CTGGTGCTGA CCGTGGGCGC GCTCGCGCTG ACGCTCTGGC TGCGCTATCG CCGCGGCAAG
TTCGGCACGC GGCTGATGTC GAAGCTTGCC GTGTTCTTCG GCGTGGTGGG CGTATTGCCG
GGCGTTCTGA TCTATCTCGT CTCGCTGCAG TTTGTTTCCC GCAGTATCGA GTCGTGGTTC
GACGTGCGCG TGGAAACCGC GCTCGAGGCC GGCCTCAATC TCGGCCGCTC CACCATCGAC
AGCCAGTTGG CCGACCTTCA GGGCAAGGCA CGCTTGATGG CCGACCAGCT GACCGGCTCG
ACCGGCATGG CAACGTCACT GCAACTGAAC CGCCTGCGCG AGCAGTACGG CGTACAGGAA
GCCGCGATCT TTACAGGCAG CGGCCGCGTG CTGGCAACCG CGTCGAGCAG CTATGCGTCG
CTGGTGCCGG ACCTGCCATC CGGCGTGCTG GCAGAGCAAG CGCGCATGGC CGGAGGCTAT
GCGGCAGTGG AGGGTGGCAC CGATCCGTCG ACTGGCGACA AACCGCAGCC CAATGTCGAT
AGCAGCCATC TCTACCGGCT GCGCGTGATC ATTCCGCTGG GGCCCGCGCC GAGCGCGGCA
GCCTCCGACG ATCAGGCACA GGCCACTGCA AGCGCTGCCG TAGCCGCGGC GGCGCGTACC
CAGCATCCCC CGCCAAAACT CGGCCTGCCC GTGCCGAGCA GTCGTTGGGC AGGCTCGGGC
CTGTCCGTGG AGCGCCGCCC CGAGGATGCG CCCGCCACGG GCTTCGGCCT GGTGGGCGAC
ACTGTGCGCG AGGAGCGATA CCTGCAGGTC CTGCACCCGG TACCTGGCGT GCTGGCGCGC
AATGCCGACG AGGTCCAGCG GGCCTATCAG GAATATCAGG AAAAGGCGCT GGGCCGCACC
GGCCTGCGCA AGATGTACAT TGGCACGCTG ACGCTGACGC TGTTCCTCGC CGTGTTTATC
GCCGTGATGC TGGCGCTGCT GCTGGGCGGC CAGCTAGCCC GCCCGCTGCT GATGCTGCTG
CAGGGCACGA AGGAAGTGGC GGAGGGCGAC CTCTCTCCCA AGCGTGAACT CAAGAGCCGC
GACGAACTCG GGATGCTGAC CCAGCAGTTC AACCAGATGA CGCGCCAGCT TGCTGAAGCG
CGCATCGCCG TGGAAGAGAA TCGCAGTGCG CTCGAGCAGT CGAAGGCGTA TCTGGAAAGC
GTGCTGCGGA ATCTGACCGC AGGTGTGCTC GTGTTCGACC GGCGCTTTGT GCTGATCACC
ACCAACCCCG GCGCCGAGCG CATCTTCCGC CAGCCGCTCA ACGGTGTGCT GGGGCACCCG
GTGGAACAGA TCCCCGGCAT GAACGACTTC GCGGAGATCG TGCGTCAGGC ATTTTCCGAG
CAGACCACCA GCGAGGTCCT GGGTGGCGCG CAGCACTGGC AGAAGCAGAT CGAGTTGCCG
CAGGGCGACG AGGAGCAGCC GCTCACACTG CTGGTTCGCG GCGCGCATCT TCCTGGCGGC
AGCCATGACG AACCGGGCTA CGTGGTGGTG TTCGACGATA TCTCAGACGT GATCTCGGCA
CAGCGTTCGG TGGCCTGGGG AGAAGTGGCG CGCCGTCTTG CCCACGAGAT CAAGAATCCG
CTGACACCGA TCCAGCTATC GGCGGAACGG CTGCAGATGA AGCTGTCCCC TAAACTTGAG
ACGTCGGATG CCGAAGTACT GAAACGTGGG GCGGCGACAA TCGTCAACCA GGTGGCAGCG
ATGAAGCGCA TGGTCGATGA TTTCCGCGAC TACGCGCGCA CGCCGCCGGC TGTGATGCAG
TCGCTGCCGC TCAACGGCCT GGTGTCGGAA GTCCTGCATC TTTACGGCAT CGATGACCCT
GCCGTGCACG AGCACCCCGT GATCCATCCG ACGCTGGACA CGGATATGCC TGAAATCAAA
GGCGATCCGA CCCAACTCAG GCAAGTGATT CACAACCTGT TGCAAAATGC CCAGGATGCG
GTGGCGGAGA ACGTTGCGGC CGGTAGGGCG GCGCCCCATA TCACTCTGCA CACCGAGACT
GTAGAATACA AAGATTCTGC CGGCGAAGAC CGGCAAGCCG TCAAGCTGTC CATAGCGGAC
AATGGCCCCG GCTTCGCACC ACGGATTCTG AGCCGCGCGT TCGAACCCTA TGTGACCACG
AAGGCCAAGG GCACGGGTCT CGGGCTGGCG ATGGTGAAAA AGATCATTGA CGAACATGGC
GCACGCATCG AGGTGCGCAA TCGCATGAAC GGCACCGAGA TCATTGGCGC TCAGATCTCG
ATCCTGTTCG TTAAGCTGGC ATAG
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| Protein sequence | MNGNPWDSRF RRLLYRVVVG IIVFLALVLV GLLAGASANT EFFDRYFTLL FKINLVVGAL
LVLTVGALAL TLWLRYRRGK FGTRLMSKLA VFFGVVGVLP GVLIYLVSLQ FVSRSIESWF
DVRVETALEA GLNLGRSTID SQLADLQGKA RLMADQLTGS TGMATSLQLN RLREQYGVQE
AAIFTGSGRV LATASSSYAS LVPDLPSGVL AEQARMAGGY AAVEGGTDPS TGDKPQPNVD
SSHLYRLRVI IPLGPAPSAA ASDDQAQATA SAAVAAAART QHPPPKLGLP VPSSRWAGSG
LSVERRPEDA PATGFGLVGD TVREERYLQV LHPVPGVLAR NADEVQRAYQ EYQEKALGRT
GLRKMYIGTL TLTLFLAVFI AVMLALLLGG QLARPLLMLL QGTKEVAEGD LSPKRELKSR
DELGMLTQQF NQMTRQLAEA RIAVEENRSA LEQSKAYLES VLRNLTAGVL VFDRRFVLIT
TNPGAERIFR QPLNGVLGHP VEQIPGMNDF AEIVRQAFSE QTTSEVLGGA QHWQKQIELP
QGDEEQPLTL LVRGAHLPGG SHDEPGYVVV FDDISDVISA QRSVAWGEVA RRLAHEIKNP
LTPIQLSAER LQMKLSPKLE TSDAEVLKRG AATIVNQVAA MKRMVDDFRD YARTPPAVMQ
SLPLNGLVSE VLHLYGIDDP AVHEHPVIHP TLDTDMPEIK GDPTQLRQVI HNLLQNAQDA
VAENVAAGRA APHITLHTET VEYKDSAGED RQAVKLSIAD NGPGFAPRIL SRAFEPYVTT
KAKGTGLGLA MVKKIIDEHG ARIEVRNRMN GTEIIGAQIS ILFVKLA
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