Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3546 |
Symbol | |
ID | 4040394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3844603 |
End bp | 3845799 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978963 |
Product | major facilitator transporter |
Protein accession | YP_585687 |
Protein GI | 94312477 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCG CCACCGCCCA ACGCGCCGAC GCCCCTGCCG CCTGGATCAC TCCCCTCCTG GCCACCGCGT GCGGCATGAT CGTCGCCAAC CTCTACTACG CCCAGCCACT GGTTGGTCCG ATCGCGCGGG CGCTCGAGCT TTCTCCCGAG ATCGCCGGCC TGATCGTCAC GCTGATCCAG ATCGGCTATT GCGTGGGCCT GCTGCTGCTG GTGCCCTTGG GCGATATCGT CGAGAACCGC AAGCTTGTAC TGGCGCTGAT CGCCGGCTGT GCGGTGGCAT TGGTCGCGGC AGCGCTGGCT ACGCACGCGA GCGTCTTCCT GATCGCTGGC TGCGCGATAG GCCTGTGCTC GGTGGCTGTG CAGGTACTGG TGCCGTTCGC GGCACACCTC GCGCCCGAAC ATGCGCGCGG CCGGGCCGTC GGCAACGTGA CCAGCGGCCT GCTGATGGGC ATCATGCTGG CGCGCCCGGT ATCGAGCCTG GTGGCGGACC TGTTCGGCTG GCATACGATC TTCGCCGCGT CGGCCGTGGC CATGGTGCTG CTTGGCGTGG TGCTGTCGCG CAAGCTGCCG CAGCGCCAGC CGGCGCCCGG CGTGAACTAT GTCGAGATGC TTGGTTCGAT GGGGCACCTG TTGCGCACGC AGCCGGTGCT GCGGCGGCGC GCGATGTATC AGGCGAGCAT GTTCGGCGTA TTCAGCCTGT TCTGGACCAC CACGCCGCTG TACCTGGCCG GGCCCGCTTT CCATATGTCC CAGACCGGCA TCGCCGTGTT CGCGCTCGTG GGCGTGGCCG GCGCGATTGC CGCGCCGATG GCCGGCCGCT ATGCCGATCG TGGCCACAGC CGCCAGATGA CTGCCATCGC ACTGGCGCTG GGCGCAGGCT CCTTCCTGCT GAGCCGCATC GGCGTCGAAG GTTCGCTCAT GTCACTGGCG GCCTTGACCG TCGCGGCCGT CGTGCTCGAC TTTGCCGTGT CGGCCAACCT GGTGATCGGG CAGCGCGCGA TCTTCTCTTT GTCCGCGGAA CATCGCAGCC GCCTGAATGG GCTCTACATG GCCATCTTCT TCGTTGGCGG TGCGATCGGC TCGTCGGTTG GCGCATGGGC CTATGCGCGT GCCGGCTGGC CGCTGGCGAG CTGGATCGGC TTCGCCTTGC CGGCCATCGC CCTGCTCTAT TTCCGAACCG AGCCTGCAAG CACCTGA
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Protein sequence | MTSATAQRAD APAAWITPLL ATACGMIVAN LYYAQPLVGP IARALELSPE IAGLIVTLIQ IGYCVGLLLL VPLGDIVENR KLVLALIAGC AVALVAAALA THASVFLIAG CAIGLCSVAV QVLVPFAAHL APEHARGRAV GNVTSGLLMG IMLARPVSSL VADLFGWHTI FAASAVAMVL LGVVLSRKLP QRQPAPGVNY VEMLGSMGHL LRTQPVLRRR AMYQASMFGV FSLFWTTTPL YLAGPAFHMS QTGIAVFALV GVAGAIAAPM AGRYADRGHS RQMTAIALAL GAGSFLLSRI GVEGSLMSLA ALTVAAVVLD FAVSANLVIG QRAIFSLSAE HRSRLNGLYM AIFFVGGAIG SSVGAWAYAR AGWPLASWIG FALPAIALLY FRTEPAST
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