Gene Rmet_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3537 
Symbol 
ID4040385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3835087 
End bp3835599 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content60% 
IMG OID637978954 
Productnuclear protein SET 
Protein accessionYP_585678 
Protein GI94312468 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0685626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA AGGGCACGGA CACCAAAGAT AAAGAGAAGA AGGCGGGAAA GAAGAAGACC 
GCCAGTGATC GCATCGAGGT GCGCCAGTCG GGCGTGCATG GCAAGGGCGT CTACGCGATC
GGCCAAATCG CCGAGGGTGA GCGCGTGATC GAGTACAAGG GCGAGCACAT CTCCTGGAAG
GAAGCGCTCA AGCGCCATCC GCACGATCCG AACGACCCGA ATCACACTTT CTATTTCAGT
CTGGACGACG GCGACGTGAT CGACGCCAAG TTCGGCGGAA ACCGCGCGCG CTGGATCAAT
CACGCCTGCG ATCCGAACTG CGAGGCGCGC GAGAAGAAGG GGCGCGTGTT CATCCACGCA
CTGCGCGATA TCGAGCCGGG CGAGGAACTG TTCTACGACT ACGGTCTGGT GATCGACGCG
CGCTACACAA AGAAGCTCAA GCAGGAATAC GAGTGCCGCT GCGGCAGCCC CAAGTGCCGT
GGCACGATGC TGGCGCCGAA GGACAAGAAG TAA
 
Protein sequence
MSDKGTDTKD KEKKAGKKKT ASDRIEVRQS GVHGKGVYAI GQIAEGERVI EYKGEHISWK 
EALKRHPHDP NDPNHTFYFS LDDGDVIDAK FGGNRARWIN HACDPNCEAR EKKGRVFIHA
LRDIEPGEEL FYDYGLVIDA RYTKKLKQEY ECRCGSPKCR GTMLAPKDKK