Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3537 |
Symbol | |
ID | 4040385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3835087 |
End bp | 3835599 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637978954 |
Product | nuclear protein SET |
Protein accession | YP_585678 |
Protein GI | 94312468 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0685626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGACA AGGGCACGGA CACCAAAGAT AAAGAGAAGA AGGCGGGAAA GAAGAAGACC GCCAGTGATC GCATCGAGGT GCGCCAGTCG GGCGTGCATG GCAAGGGCGT CTACGCGATC GGCCAAATCG CCGAGGGTGA GCGCGTGATC GAGTACAAGG GCGAGCACAT CTCCTGGAAG GAAGCGCTCA AGCGCCATCC GCACGATCCG AACGACCCGA ATCACACTTT CTATTTCAGT CTGGACGACG GCGACGTGAT CGACGCCAAG TTCGGCGGAA ACCGCGCGCG CTGGATCAAT CACGCCTGCG ATCCGAACTG CGAGGCGCGC GAGAAGAAGG GGCGCGTGTT CATCCACGCA CTGCGCGATA TCGAGCCGGG CGAGGAACTG TTCTACGACT ACGGTCTGGT GATCGACGCG CGCTACACAA AGAAGCTCAA GCAGGAATAC GAGTGCCGCT GCGGCAGCCC CAAGTGCCGT GGCACGATGC TGGCGCCGAA GGACAAGAAG TAA
|
Protein sequence | MSDKGTDTKD KEKKAGKKKT ASDRIEVRQS GVHGKGVYAI GQIAEGERVI EYKGEHISWK EALKRHPHDP NDPNHTFYFS LDDGDVIDAK FGGNRARWIN HACDPNCEAR EKKGRVFIHA LRDIEPGEEL FYDYGLVIDA RYTKKLKQEY ECRCGSPKCR GTMLAPKDKK
|
| |