Gene Rmet_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3527 
Symbol 
ID4040375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3819450 
End bp3820418 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID637978944 
Productornithine cyclodeaminase 
Protein accessionYP_585668 
Protein GI94312458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC CCGCCGCTTC GTTCGTCCCC CTGGATGCCG CCGCCACGGC GGCACGCCTG 
CCTTATCCGG AACTGGCCCA GGCCATCGCG GCCATGCTGG CCGAGTTGCG CGACGGGACC
GCCATGGCGC CGCCGCGCAT CGCGCTGCCG GTCGGTGACG CCGAGCGCGG GCATGGCACG
CTGCTGGTCA TGCCGGCACG CAACCGCGAC ATCGTGATGA CCAAGAACAT CACGGTGCAT
CCCGACAATC CGCAGCGAGG GCTGCCCAAT ATCCTCGGCG AGGTGGTCGT CGCCAACGCA
CACACTGGCG AACGGATCGC ATTGCTCGAT GGCCCGACCG TCACGGGCCG CCGCACGGCT
GCCGTGTCGC TGCTCGCGGC CCAGTCGTTC GCGCCGGTGC CGGATGGCGA GCTTCTGATC
GTCGGAGCAG GCGTGCAGGC GCAGACGCAT CTGGAGGCGT TCGTGGCTGG CTTACCCGTT
CGCAAGGTCT GGCTGCATTC GCGCACGCGA GACAAGGCCG AGGCGCTGGC GGAGCACGCT
GGGCGCCTAG GCGTCTCGGC CACGGTGATC GACGATGTGG CGGAGGTGCT GCCGCGTGTG
TCGATGGTGG TGACGGTGAC ATCGAGCCGC ACGCCGGTCC TGCCCGATCT CGACAGCGGC
CTGTGGACCG ACCGCCATTT CATTGCTGCA GTTGGCGCAT TCCGACCGGA AATGTGCGAA
TTGCCCCCGC GGCTTTGCCA TGCGGCGGCG GCCAGTGGAC GTCTGCTGGC GGACACGCTT
TTCGGAATCG AGGACGAAGC GGGAGATCTG CTGCAGGCCG GCATCGACTG GCAGACCGTG
CAGCCATTCG AGACGGCGAT CCTGGAGGCT GACGCATTGC GTGCGCGGAC CGGGAGTCCC
CTCGTGTTCA AGAGCGTGGG CTACGCGCTC TGGGATCTTG CAGCCTGCGC GCTGGCCAGC
AAAAAGTGA
 
Protein sequence
MTAPAASFVP LDAAATAARL PYPELAQAIA AMLAELRDGT AMAPPRIALP VGDAERGHGT 
LLVMPARNRD IVMTKNITVH PDNPQRGLPN ILGEVVVANA HTGERIALLD GPTVTGRRTA
AVSLLAAQSF APVPDGELLI VGAGVQAQTH LEAFVAGLPV RKVWLHSRTR DKAEALAEHA
GRLGVSATVI DDVAEVLPRV SMVVTVTSSR TPVLPDLDSG LWTDRHFIAA VGAFRPEMCE
LPPRLCHAAA ASGRLLADTL FGIEDEAGDL LQAGIDWQTV QPFETAILEA DALRARTGSP
LVFKSVGYAL WDLAACALAS KK