Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3527 |
Symbol | |
ID | 4040375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3819450 |
End bp | 3820418 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978944 |
Product | ornithine cyclodeaminase |
Protein accession | YP_585668 |
Protein GI | 94312458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC CCGCCGCTTC GTTCGTCCCC CTGGATGCCG CCGCCACGGC GGCACGCCTG CCTTATCCGG AACTGGCCCA GGCCATCGCG GCCATGCTGG CCGAGTTGCG CGACGGGACC GCCATGGCGC CGCCGCGCAT CGCGCTGCCG GTCGGTGACG CCGAGCGCGG GCATGGCACG CTGCTGGTCA TGCCGGCACG CAACCGCGAC ATCGTGATGA CCAAGAACAT CACGGTGCAT CCCGACAATC CGCAGCGAGG GCTGCCCAAT ATCCTCGGCG AGGTGGTCGT CGCCAACGCA CACACTGGCG AACGGATCGC ATTGCTCGAT GGCCCGACCG TCACGGGCCG CCGCACGGCT GCCGTGTCGC TGCTCGCGGC CCAGTCGTTC GCGCCGGTGC CGGATGGCGA GCTTCTGATC GTCGGAGCAG GCGTGCAGGC GCAGACGCAT CTGGAGGCGT TCGTGGCTGG CTTACCCGTT CGCAAGGTCT GGCTGCATTC GCGCACGCGA GACAAGGCCG AGGCGCTGGC GGAGCACGCT GGGCGCCTAG GCGTCTCGGC CACGGTGATC GACGATGTGG CGGAGGTGCT GCCGCGTGTG TCGATGGTGG TGACGGTGAC ATCGAGCCGC ACGCCGGTCC TGCCCGATCT CGACAGCGGC CTGTGGACCG ACCGCCATTT CATTGCTGCA GTTGGCGCAT TCCGACCGGA AATGTGCGAA TTGCCCCCGC GGCTTTGCCA TGCGGCGGCG GCCAGTGGAC GTCTGCTGGC GGACACGCTT TTCGGAATCG AGGACGAAGC GGGAGATCTG CTGCAGGCCG GCATCGACTG GCAGACCGTG CAGCCATTCG AGACGGCGAT CCTGGAGGCT GACGCATTGC GTGCGCGGAC CGGGAGTCCC CTCGTGTTCA AGAGCGTGGG CTACGCGCTC TGGGATCTTG CAGCCTGCGC GCTGGCCAGC AAAAAGTGA
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Protein sequence | MTAPAASFVP LDAAATAARL PYPELAQAIA AMLAELRDGT AMAPPRIALP VGDAERGHGT LLVMPARNRD IVMTKNITVH PDNPQRGLPN ILGEVVVANA HTGERIALLD GPTVTGRRTA AVSLLAAQSF APVPDGELLI VGAGVQAQTH LEAFVAGLPV RKVWLHSRTR DKAEALAEHA GRLGVSATVI DDVAEVLPRV SMVVTVTSSR TPVLPDLDSG LWTDRHFIAA VGAFRPEMCE LPPRLCHAAA ASGRLLADTL FGIEDEAGDL LQAGIDWQTV QPFETAILEA DALRARTGSP LVFKSVGYAL WDLAACALAS KK
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