Gene Rmet_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3522 
Symbol 
ID4040370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3814104 
End bp3815012 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID637978939 
Productalpha/beta hydrolase fold 
Protein accessionYP_585663 
Protein GI94312453 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.775525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CTGGCCTTCC AGGCGCGCGC GAATCCGCCG TAACCGGAGC CGTACCCACC 
GAAACACGCC AACGAATGCG CGATGGCACC GAACTGCTGC TGCGCACCTG GCTGCCTGAT
CCCCAACGCT TTGCCGAGCC GCTTGGCACG GTGCTGCTGG TACATGGGCT GGCCGAGCAT
AGCGGGCGCT ATGGCCACGT TGCTGCAGCG CTTTGCGCGC TCGGCCTGCG CGTGCGGGCC
TACGACCATC GCGGCCACGG CGCGAGTGGC GGGCCGCGCA TGGTGGCGCC CACGCCGGAC
AGCTATCTCG ACGATCTGGC CGAAATCTAC GATGGTGCAA TGCGGCAATG GAACGAATTG
CCGATCGTGC TCGGGCACAG CATGGGCGGA CTCATTGCTG CGCGCTTTGC CACCGCGCGC
GTGCGGCCGA TCCGCGCGCT GGTGCTGTCG TCGCCCGCGC TGGCGCTTCG TCTGTCCAAT
TCTATGCTTA CGATGCATCG AGTGCTACTT GCTTTGATGC CTCGTATTCG TGTGCCGAAT
CCCATTGATG CCCGGCTGTT GTCCCACGAT GTCGAAGTGG GGCGCGCATA TCGCACCGAT
CCGCTGGTGC AGGGGACGAT CAGCGCCAGC GTGCTGGAGA CATTCATCCG GGGAATGCCG
CAGGCCCTGG CTGATGCGCC GCGGCTGGAA GCGCCCATGC TGATGCTCGT GGGTGGCGCG
GACCGCATCG TCGATCCGGA GGGCAGCCGC ATCTTCTTCG AGAGCGCGCC AGAGGATCTG
CGCGAGATGG TCTGGTTCGA CACTGGCTAT CACGAGATAT TCAATGAAGC TGAGCCGTTG
CGCGGCGAGG TGTTTGCGGC ACTGACCGGC TGGCTGCGGC AGCGCCTGGA GACTCCGGCA
AAGCACTGA
 
Protein sequence
MTAAGLPGAR ESAVTGAVPT ETRQRMRDGT ELLLRTWLPD PQRFAEPLGT VLLVHGLAEH 
SGRYGHVAAA LCALGLRVRA YDHRGHGASG GPRMVAPTPD SYLDDLAEIY DGAMRQWNEL
PIVLGHSMGG LIAARFATAR VRPIRALVLS SPALALRLSN SMLTMHRVLL ALMPRIRVPN
PIDARLLSHD VEVGRAYRTD PLVQGTISAS VLETFIRGMP QALADAPRLE APMLMLVGGA
DRIVDPEGSR IFFESAPEDL REMVWFDTGY HEIFNEAEPL RGEVFAALTG WLRQRLETPA
KH