Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3518 |
Symbol | |
ID | 4040366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3809177 |
End bp | 3810385 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978935 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_585659 |
Protein GI | 94312449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.36456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA CTCGACTGGC CGTCGCAGTG GCGGCGACTG TCCTTGGTGC GTTTGCAGGC GGCGCTTCGG CGCAGGTTTC GGGTGACACG GTAAAGATCG GCTACATCAC CGACATGTCG GGCCTGTACG CCGACATCGA CGGCCCGGGC GGCCTGGAAG CGGTGAAGAT GGCCATCGAG GATCACGGTG GCAAGGTGCT GGGCAAGCCG ATCGAACTGG TTTCGGCCGA CCACCAGAAC AAGGCCGACA TCGCCGCCTC GAAGGCGCGC GAGTGGATGG ACCAGCAGGG TCTGGACATG CTGCTGGGCG GCACCAACTC GGCTACCGGC CTGGCCATGA ACAAGGTGGC GCAGGAGAAG AAGCGCGTCT ACTTCAACGT GGGCGCGGGC ACTGCCCGAC TGACGAACGA AGAGTGCTCG CCGTACACGG TGCACTACGC CTATGACACG GTGGCGCTTG CCAAGGGCAC CGGCAGCGCG GTGGTCAAGC AGGGCGGCAA GAAGTGGTTC TTCCTGACTG CCGACTACGC ATTCGGTCAC TCGCTCGAGA ACGACACGGC AGCCGTGGTG AAGGCCAACG GCGGCACGGT GGTGGGTTCG GTGCGCCACC CGCTGTCGGC ATCGGACTTC TCGTCGTTCC TGCTGCAGGC GCAGTCGTCA AAGGCTGACA TCCTGGGCCT GGCCAACGCC GGTGGCGACA CGATCAACGC GATCAAGGCG GCCAAGGAAT TCGGCATCAC GAAGAACATG AAGATCGCCG GCCTGCTGAT GTTCATCAAC GACATTCACT CGCTGGGTCT GAAGAACACC GAAGGCCTGC TGATGACCGA CAGCTGGTAC TGGGACATGA ACGACGACAC GCGCAAGTTC GCGAACCGCT TCTTCGGCAA GATGAAGAAG ATGCCGAGCA GCCTGCAGGC AGCCGACTAC TCCGCGATCA GCACGTACCT GAAGGCCGTG GAAGCCGCCA AGACCGATGA TCCGGACAAG GTCATGGCCG AGCTGAAGAA GATGAAGATC AGCGACTTCT ACAACAAGAG CTACATCCGT GCCGATGGCC GCAACATCCA CGACATGTAC CTGATGCAGG TGAAGGCGCC GGCCGATTCG AAGAAGCCGT GGGACTACCT GAAGATCGTA ACGACGATCC CGGGCGACCA GGCGTTCACG ACGCCGGCCG AGTCGAAGTG CGCGCTGTTG AAGAAGTAA
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Protein sequence | MKMTRLAVAV AATVLGAFAG GASAQVSGDT VKIGYITDMS GLYADIDGPG GLEAVKMAIE DHGGKVLGKP IELVSADHQN KADIAASKAR EWMDQQGLDM LLGGTNSATG LAMNKVAQEK KRVYFNVGAG TARLTNEECS PYTVHYAYDT VALAKGTGSA VVKQGGKKWF FLTADYAFGH SLENDTAAVV KANGGTVVGS VRHPLSASDF SSFLLQAQSS KADILGLANA GGDTINAIKA AKEFGITKNM KIAGLLMFIN DIHSLGLKNT EGLLMTDSWY WDMNDDTRKF ANRFFGKMKK MPSSLQAADY SAISTYLKAV EAAKTDDPDK VMAELKKMKI SDFYNKSYIR ADGRNIHDMY LMQVKAPADS KKPWDYLKIV TTIPGDQAFT TPAESKCALL KK
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