Gene Rmet_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3513 
Symbol 
ID4040361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3803968 
End bp3805116 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content64% 
IMG OID637978930 
Productextracellular ligand-binding receptor 
Protein accessionYP_585654 
Protein GI94312444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0776121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA AGCGTGCCAG CTTGCTGGCT CTTGCCGCCG CCAGCCTGTT CGCCGGCGCA 
GCCAACGCCC AGGTGAAGGT TGGAGTCACG GTATCGGCCA CGGGCCCTGC CGCATCGCTC
GGCATTCCCG AGAAGAATAC GTTCACGCTG CTGCCGAAGG AGATCGCAGG CAAGAAGATC
GAGTACATCG TGCTCGACGA CGCCACCGAC ACGACCACGG CGGTCAAGAA CACGCGCAAG
CTGATCAGCG AGGACAAGGT AGACGTGGTG GTGGGCTCCA CCGTCACGCC GAACTCGCTG
GCGATGGTGG ACGTTGCCGC CGAGAGTGAA ACGCCGATGA TCTCGATGGC CGCGTCGGCG
CGCATTATCG AACCGATGGA TGCCAAGCGC GCGTGGATTT TCAAGACGCC GCAGAACGAC
TCGCACATGG CCACCGCCAT CGCCGAGCAC ATGACCAACA ACAACGTGAA GACGGTGGCG
TTCATCGGCT TCGCGGATGC CTATGGCGAT AGCTGGGGTC AGGAGTTCGC CAAGGTCGCC
GAGATGCGCA AGATCAAGGT GGTCGCCAAC GAACGGTTTG CGCGCACCGA TAACTCTGTG
ACCGGGCAGG TGCTGAAGAT GATGGGCGCC AATCCGGATG CGGTGCTGAT CGCTGGTTCG
GGTACGCCGG CCGCGCTGCC GGAGAAGGCG CTCAAGGAGC GCGGCTACAA GGGCAAGATC
TACCAGACGC ACGGTGTGGC CAACCCCGAC TTCCTGCGCG TGTGCGGCAA GGACTGCGAA
GGCACGTTCC TGCCTGCCGG CCCGCTGCTG GTGGCCGAGC AACTGCCTGA CAGCAATCCG
GTCAAGAAGC CGGCCCTGAC GTACAAGACG GCTTACGAGA AGGCCTTCGG CGGTCAGGTG
TCGACGTTCG GCGGCCATGC CTGGGACGCG GGCCTGCTGC TGCAGAACGC GATTCCTGAA
GCGCTCAAGA AGGGTCAGCC CGGCACGAAG GAGTTCCGCA AGGCGCTGCG CGATGCGCTC
GAGAAGACCA CGAACCTGCC GGTGTCGCAC GGCATCATCA ACATGACCCC CACCGACCAC
CTCGGCATGG ACCAGCGCGC GCGCGTGATG GTGCAGATCG TCGACGGCAA GTGGAAGCTG
CAGAAGTAA
 
Protein sequence
MTFKRASLLA LAAASLFAGA ANAQVKVGVT VSATGPAASL GIPEKNTFTL LPKEIAGKKI 
EYIVLDDATD TTTAVKNTRK LISEDKVDVV VGSTVTPNSL AMVDVAAESE TPMISMAASA
RIIEPMDAKR AWIFKTPQND SHMATAIAEH MTNNNVKTVA FIGFADAYGD SWGQEFAKVA
EMRKIKVVAN ERFARTDNSV TGQVLKMMGA NPDAVLIAGS GTPAALPEKA LKERGYKGKI
YQTHGVANPD FLRVCGKDCE GTFLPAGPLL VAEQLPDSNP VKKPALTYKT AYEKAFGGQV
STFGGHAWDA GLLLQNAIPE ALKKGQPGTK EFRKALRDAL EKTTNLPVSH GIINMTPTDH
LGMDQRARVM VQIVDGKWKL QK