Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3513 |
Symbol | |
ID | 4040361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3803968 |
End bp | 3805116 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978930 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_585654 |
Protein GI | 94312444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0776121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA AGCGTGCCAG CTTGCTGGCT CTTGCCGCCG CCAGCCTGTT CGCCGGCGCA GCCAACGCCC AGGTGAAGGT TGGAGTCACG GTATCGGCCA CGGGCCCTGC CGCATCGCTC GGCATTCCCG AGAAGAATAC GTTCACGCTG CTGCCGAAGG AGATCGCAGG CAAGAAGATC GAGTACATCG TGCTCGACGA CGCCACCGAC ACGACCACGG CGGTCAAGAA CACGCGCAAG CTGATCAGCG AGGACAAGGT AGACGTGGTG GTGGGCTCCA CCGTCACGCC GAACTCGCTG GCGATGGTGG ACGTTGCCGC CGAGAGTGAA ACGCCGATGA TCTCGATGGC CGCGTCGGCG CGCATTATCG AACCGATGGA TGCCAAGCGC GCGTGGATTT TCAAGACGCC GCAGAACGAC TCGCACATGG CCACCGCCAT CGCCGAGCAC ATGACCAACA ACAACGTGAA GACGGTGGCG TTCATCGGCT TCGCGGATGC CTATGGCGAT AGCTGGGGTC AGGAGTTCGC CAAGGTCGCC GAGATGCGCA AGATCAAGGT GGTCGCCAAC GAACGGTTTG CGCGCACCGA TAACTCTGTG ACCGGGCAGG TGCTGAAGAT GATGGGCGCC AATCCGGATG CGGTGCTGAT CGCTGGTTCG GGTACGCCGG CCGCGCTGCC GGAGAAGGCG CTCAAGGAGC GCGGCTACAA GGGCAAGATC TACCAGACGC ACGGTGTGGC CAACCCCGAC TTCCTGCGCG TGTGCGGCAA GGACTGCGAA GGCACGTTCC TGCCTGCCGG CCCGCTGCTG GTGGCCGAGC AACTGCCTGA CAGCAATCCG GTCAAGAAGC CGGCCCTGAC GTACAAGACG GCTTACGAGA AGGCCTTCGG CGGTCAGGTG TCGACGTTCG GCGGCCATGC CTGGGACGCG GGCCTGCTGC TGCAGAACGC GATTCCTGAA GCGCTCAAGA AGGGTCAGCC CGGCACGAAG GAGTTCCGCA AGGCGCTGCG CGATGCGCTC GAGAAGACCA CGAACCTGCC GGTGTCGCAC GGCATCATCA ACATGACCCC CACCGACCAC CTCGGCATGG ACCAGCGCGC GCGCGTGATG GTGCAGATCG TCGACGGCAA GTGGAAGCTG CAGAAGTAA
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Protein sequence | MTFKRASLLA LAAASLFAGA ANAQVKVGVT VSATGPAASL GIPEKNTFTL LPKEIAGKKI EYIVLDDATD TTTAVKNTRK LISEDKVDVV VGSTVTPNSL AMVDVAAESE TPMISMAASA RIIEPMDAKR AWIFKTPQND SHMATAIAEH MTNNNVKTVA FIGFADAYGD SWGQEFAKVA EMRKIKVVAN ERFARTDNSV TGQVLKMMGA NPDAVLIAGS GTPAALPEKA LKERGYKGKI YQTHGVANPD FLRVCGKDCE GTFLPAGPLL VAEQLPDSNP VKKPALTYKT AYEKAFGGQV STFGGHAWDA GLLLQNAIPE ALKKGQPGTK EFRKALRDAL EKTTNLPVSH GIINMTPTDH LGMDQRARVM VQIVDGKWKL QK
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