Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3512 |
Symbol | |
ID | 4040360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3802744 |
End bp | 3803796 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978929 |
Product | inner-membrane translocator |
Protein accession | YP_585653 |
Protein GI | 94312443 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0408964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTAT CGATTGCGGC CATTCTGGCG CAGGACGGCA TCACCTCCGG CGCGATCTAC GCGCTGCTGG CACTGGCGCT GGTGCTGGTG TTCTCGGTGA CGCGCGTCAT CTTCATCCCC CAGGGCGAGT TTGTTGCATA CGGCGCGCTG ACGCTTGCAG CGATGCAGGC CGGCCATGCA CCCAAGACGA CGTGGCTGTT GCTCACGATG GGCGTGCTGA CATTTCTCTA TGAGTGCGTG ACCGTGATGC GCAGCCCCGA GTTGCGCAGT ACCGCGCCGC GGAGGTTGGC GATTCTCGCG GGCAAGTACC TGCTGTTTCC GGGTGCCGTG CATCTGGTGG TGCAGCAGTA CGGTGGTCAA CCCTTGCCGA TGCTCGCGCA GATCGCGCTG ACGCTGCTCG TTGTGATTCC GCTCGGACCG ATGCTGTATC GGCTCGCGTA CCAGCCCTTG GCGGAGGCGA GCACGCTGGT GCTGCTGATC GTATCCGTTG GGGTGCATTT CGCACTGGTG GGCTTGGGGC TCGTGATGTT CGGCGCGGAA GGGTCGCGCA CGACGGCGTT CTCCGATGCG CGCTTCGAAG TTGGCAGTCT CACCATATCG GGGCAAAGCC TCTGGGTCGT GGCGGTGTCG GCATTGCTGA TTGGCGCGCT CTGGTTCTAT TTCGATCGCA CGCTGCAGGG CAAGGCATTG CGTGCCACGG CGGTGAACCG GCTTGGCGCG CGTCTGGTCG GCATCGGTAC CACGCAGGCG GGCCGCCTGT CGTTCACGCT GGCTGCGGCG ATGGGCGCGC TGTGCGGCAT CCTGATCGCG CCGCTGACGA CGATCTACTA CGAGTCCGGA TTCCTGGTTG GTCTCAAGGG CTTCGTTGGA GCGATCGTCG GCGGTCTTGT CAGCTATCCG GTGGCCGCGC TTGGCGCGCT GCTGGTGGGG CTGCTTGAAT CGTATTCGTC GTTCTGGGCC AGCGCGTTCA AGGAGGTGAT CGTCTTCACG CTGATCCTTC CGGTGCTGTT GTGGCGCTCG CTCACGAGCC GGCATGTCGA GGAAGAGGAG TAA
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Protein sequence | MDLSIAAILA QDGITSGAIY ALLALALVLV FSVTRVIFIP QGEFVAYGAL TLAAMQAGHA PKTTWLLLTM GVLTFLYECV TVMRSPELRS TAPRRLAILA GKYLLFPGAV HLVVQQYGGQ PLPMLAQIAL TLLVVIPLGP MLYRLAYQPL AEASTLVLLI VSVGVHFALV GLGLVMFGAE GSRTTAFSDA RFEVGSLTIS GQSLWVVAVS ALLIGALWFY FDRTLQGKAL RATAVNRLGA RLVGIGTTQA GRLSFTLAAA MGALCGILIA PLTTIYYESG FLVGLKGFVG AIVGGLVSYP VAALGALLVG LLESYSSFWA SAFKEVIVFT LILPVLLWRS LTSRHVEEEE
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