Gene Rmet_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3512 
Symbol 
ID4040360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3802744 
End bp3803796 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID637978929 
Productinner-membrane translocator 
Protein accessionYP_585653 
Protein GI94312443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0408964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTAT CGATTGCGGC CATTCTGGCG CAGGACGGCA TCACCTCCGG CGCGATCTAC 
GCGCTGCTGG CACTGGCGCT GGTGCTGGTG TTCTCGGTGA CGCGCGTCAT CTTCATCCCC
CAGGGCGAGT TTGTTGCATA CGGCGCGCTG ACGCTTGCAG CGATGCAGGC CGGCCATGCA
CCCAAGACGA CGTGGCTGTT GCTCACGATG GGCGTGCTGA CATTTCTCTA TGAGTGCGTG
ACCGTGATGC GCAGCCCCGA GTTGCGCAGT ACCGCGCCGC GGAGGTTGGC GATTCTCGCG
GGCAAGTACC TGCTGTTTCC GGGTGCCGTG CATCTGGTGG TGCAGCAGTA CGGTGGTCAA
CCCTTGCCGA TGCTCGCGCA GATCGCGCTG ACGCTGCTCG TTGTGATTCC GCTCGGACCG
ATGCTGTATC GGCTCGCGTA CCAGCCCTTG GCGGAGGCGA GCACGCTGGT GCTGCTGATC
GTATCCGTTG GGGTGCATTT CGCACTGGTG GGCTTGGGGC TCGTGATGTT CGGCGCGGAA
GGGTCGCGCA CGACGGCGTT CTCCGATGCG CGCTTCGAAG TTGGCAGTCT CACCATATCG
GGGCAAAGCC TCTGGGTCGT GGCGGTGTCG GCATTGCTGA TTGGCGCGCT CTGGTTCTAT
TTCGATCGCA CGCTGCAGGG CAAGGCATTG CGTGCCACGG CGGTGAACCG GCTTGGCGCG
CGTCTGGTCG GCATCGGTAC CACGCAGGCG GGCCGCCTGT CGTTCACGCT GGCTGCGGCG
ATGGGCGCGC TGTGCGGCAT CCTGATCGCG CCGCTGACGA CGATCTACTA CGAGTCCGGA
TTCCTGGTTG GTCTCAAGGG CTTCGTTGGA GCGATCGTCG GCGGTCTTGT CAGCTATCCG
GTGGCCGCGC TTGGCGCGCT GCTGGTGGGG CTGCTTGAAT CGTATTCGTC GTTCTGGGCC
AGCGCGTTCA AGGAGGTGAT CGTCTTCACG CTGATCCTTC CGGTGCTGTT GTGGCGCTCG
CTCACGAGCC GGCATGTCGA GGAAGAGGAG TAA
 
Protein sequence
MDLSIAAILA QDGITSGAIY ALLALALVLV FSVTRVIFIP QGEFVAYGAL TLAAMQAGHA 
PKTTWLLLTM GVLTFLYECV TVMRSPELRS TAPRRLAILA GKYLLFPGAV HLVVQQYGGQ
PLPMLAQIAL TLLVVIPLGP MLYRLAYQPL AEASTLVLLI VSVGVHFALV GLGLVMFGAE
GSRTTAFSDA RFEVGSLTIS GQSLWVVAVS ALLIGALWFY FDRTLQGKAL RATAVNRLGA
RLVGIGTTQA GRLSFTLAAA MGALCGILIA PLTTIYYESG FLVGLKGFVG AIVGGLVSYP
VAALGALLVG LLESYSSFWA SAFKEVIVFT LILPVLLWRS LTSRHVEEEE