| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3510 |
|---|
| Symbol | |
|---|
| ID | 4040358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3800134 |
|---|
| End bp | 3800877 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637978927 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_585651 |
|---|
| Protein GI | 94312441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.131724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA TTCTGGAAGT GAAGGACTTG CATGTCCGCT ACGGGAAGGT CGAGGCGGTG
CATGGCGCGA ACCTCAAGGT TGAGGCAGGC AAGATCGTGA CCGTGATCGG GCCGAACGGG
GCCGGCAAGT CGACGATGCT GAATGCCGTG ATGGGCGCGC TGCCCGTCAG CGGGTCATCG
ACCGGATCGG TTCGGTTCCT CGGCCATGAC ATGGCGGGGA TTCCGGTGGA GGGGCGCGTG
GCGCGCGGGA TGTGTCTGGT GCCGGAGAAG CGTGAACTGT TCGCGTCGAT GACCGTCGAG
GACAACCTGC TGCTCGGCGC ATTCCGGCGC AAGCGCGCTG GGGAGCGCAA CTATCTGGAC
CAGAAGGATG TGGTGTACGA CCTGTTCCCG CGTCTGCGGG AGCGTGCGAA GCAGGAGGCG
GGCACGCTGT CCGGTGGCGA GCGCCAGATG CTCGCCGTGG GGCGCGCGCT GATGGCCAAG
CCGCAGTTGC TGATGCTCGA TGAGCCGAGC CTTGGTCTCG CGCCGCTGAT CGTTAAGGAG
ATCTTCCACA TCATCCACAA CCTTCGGCAA ACCGGCGTGG CGACGCTGCT GATCGAACAG
AATGCGCGGG CGGCGTTGCA GGTGGCTGAC TACGGGTATG TGATCGAGAC CGGCGACATG
GCTATGGAAG GCGAAGCGTC GGCGTTGGCG AGCAATCCAA AGGTGATCGA GACGTACCTG
GGGCTGACGA AGAAAGCGGC CTGA
|
|---|
| Protein sequence | MSLILEVKDL HVRYGKVEAV HGANLKVEAG KIVTVIGPNG AGKSTMLNAV MGALPVSGSS
TGSVRFLGHD MAGIPVEGRV ARGMCLVPEK RELFASMTVE DNLLLGAFRR KRAGERNYLD
QKDVVYDLFP RLRERAKQEA GTLSGGERQM LAVGRALMAK PQLLMLDEPS LGLAPLIVKE
IFHIIHNLRQ TGVATLLIEQ NARAALQVAD YGYVIETGDM AMEGEASALA SNPKVIETYL
GLTKKAA
|
|---|
| |