| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3506 |
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| Symbol | |
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| ID | 4040354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3794887 |
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| End bp | 3796851 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978923 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_585647 |
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| Protein GI | 94312437 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.102092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTACC CGAAAGAATT CGACGTCATA GTCGTCGGCG GTGGTCACGC CGGCACCGAA
GCAGCCCTCG CCGCCGCGCG CATGGGCTGC CAGACGCTGC TTCTGAGCCA CAACATCGAA
ACGTTGGGGC AGATGAGCTG CAATCCGTCG ATCGGTGGCA TCGGCAAGGG TCATCTCGTC
AAGGAAGTGG ACGCCATGGG CGGCGCGATG GCAGCCGCCA CGGACGAGGC GGGCATCCAG
TTCCGCATCC TGAACTCCAG CAAGGGCCCG GCCGTTCGGG CGACCCGTGC CCAAGCGGAC
CGAGTGCTGT ATCGCAAGGC CATCCGGACG CGGCTGGAGA ACCAGCCAAA CCTGATGCTA
TTCCAGCAGG CCGTGGATGA TCTGATGGTG GAGGGTGACC GCGTGGTCGG TGCTCGTACC
CAGGTTGGCA TCGATTTCCG CGCGCGCGCG GTGGTGCTGA CGGCTGGTAC CTTCCTGGAC
GGCAAGATCC ACGTCGGACT CGATAACTAC ACGGGCGGTC GTGCGGGCGA CCCTGCAGCC
GTGTCGTTGT CGGCGCGTCT CAAGGAACTG AAGCTGCCGC AAGGTCGCCT GAAGACCGGT
ACACCGCCGC GCATTGACGG CCGCACGATC GATTTTTCGG TGATGGAAGA GCAGCCCGGC
GACCTGGACC CGGTGCCGGT GTTTTCGTTC CTGGGCCGTC CGGAGCAACA TCCGCAGCAA
CTGCCGTGCT GGATCACCCA TACCAATAGC CGTACCCACG ACGTCATCCG CGGCGGGCTC
GATCGCTCGC CGATGTACAC CGGTGTGATC GAAGGAGTAG GGCCGCGCTA CTGCCCGAGC
ATCGAGGACA AGATCCATCG CTTTGCCAGC AAGGAAAGCC ATCAGATCTT CCTGGAGCCC
GAAGGGCTGA CGACCAACGA GTTCTATCCG AACGGCATCT CGACGAGCCT GCCTTTCGAC
GTACAGCTTG AGCTTGTCCA CTCGATTCGC GGACTGGAGA ACGCGCATAT CCTGCGTCCG
GGCTATGCGA TTGAGTATGA CTACTTCGAC CCGCGCGGGC TGAAGTCGTC GCTGGAGAGC
AAGGCAATTG AGGGCTTGTT CTTCGCCGGC CAGATTAATG GCACGACCGG CTATGAGGAA
GCGGCAGCAC AGGGTCTGCT GGCCGGGATA AACGCCGGTT GCTACGTACG CGAACGCGAC
GCCTGGACGC CGCGCCGCGA CCAGGCATAT CTCGGTGTGC TGGTCGATGA CCTGATCACG
CGAGGCGTGA CCGAGCCGTA CCGCATGTTC ACCAGCCGCG CGGAGTTCCG CCTGAGCCTG
CGCGAGGACA ACGCGGACAT GCGTCTGACC GAAATCGGTC GTGAACTCGG TGTGGTCGAC
GATGTGCGCT GGGATGCTTT CAATCGGAAG CGCGACGCTG TTTCACGTGA AACAGAGCGA
CTCAAGAGCA CCTGGGTCAA TCCGACCTTG TTGCCTGAAG CAGATGCCGT TCCGCTGCTC
GGTAAGGGCA TCGAGCGCGA ATACTCGCTC GCAGATCTGC TGCGTCGTCC CGAAGTCCGT
TATGAGGCGC TTGTCGCGCT GCAGGATGGC CGTTTTGCAC CAGAGACGCC GCTCGCCGAT
GACACGATGC TTGCCGAGCA GATTCGCGAG CAGATCGAGA TCGGTATCAA GTACCACGGC
TATATCGCAC GCCAGGCTGC CGAAGTAGAC AAACTCGAAG CCAACGAGTC GACCAAGTTG
CCGCCGAACT TCGACTATAC CGAGGTGCGT GGCCTGGGCT TCGAGGTGAG CCAGAAGCTG
AACCAGCATC GCCCGGAAAC GCTGGGTCAG GCTTCGCGTA TCTCCGGCGT GACGCCTGCG
GCTATCTCGC TGCTGTTGGT ACACCTGAAG AAGAAGGGCA TGGGGCGCGC CGCGGCTCAG
ACATCGGCAA CCCCGGTGGC CGGCAATGGA CAGGAGGCTG CCTGA
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| Protein sequence | MLYPKEFDVI VVGGGHAGTE AALAAARMGC QTLLLSHNIE TLGQMSCNPS IGGIGKGHLV
KEVDAMGGAM AAATDEAGIQ FRILNSSKGP AVRATRAQAD RVLYRKAIRT RLENQPNLML
FQQAVDDLMV EGDRVVGART QVGIDFRARA VVLTAGTFLD GKIHVGLDNY TGGRAGDPAA
VSLSARLKEL KLPQGRLKTG TPPRIDGRTI DFSVMEEQPG DLDPVPVFSF LGRPEQHPQQ
LPCWITHTNS RTHDVIRGGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KESHQIFLEP
EGLTTNEFYP NGISTSLPFD VQLELVHSIR GLENAHILRP GYAIEYDYFD PRGLKSSLES
KAIEGLFFAG QINGTTGYEE AAAQGLLAGI NAGCYVRERD AWTPRRDQAY LGVLVDDLIT
RGVTEPYRMF TSRAEFRLSL REDNADMRLT EIGRELGVVD DVRWDAFNRK RDAVSRETER
LKSTWVNPTL LPEADAVPLL GKGIEREYSL ADLLRRPEVR YEALVALQDG RFAPETPLAD
DTMLAEQIRE QIEIGIKYHG YIARQAAEVD KLEANESTKL PPNFDYTEVR GLGFEVSQKL
NQHRPETLGQ ASRISGVTPA AISLLLVHLK KKGMGRAAAQ TSATPVAGNG QEAA
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