Gene Rmet_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3499 
Symbol 
ID4040347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3790053 
End bp3790319 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content58% 
IMG OID637978916 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_585640 
Protein GI94312430 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000882586 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.140355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAT ATCTCGCCAA CATCCAGGGT CTGACCGCTA TCGGTATCGG CATCATCATC 
GGTCTGGGCG CTATCGGCGC CTGCCTGGGT ATCGCCCTGA TGGGTGGCAA GTACATCGAA
GCGTGCGCAC GTCAGCCTGA GCTGATGAAC CCGCTGCAAA CCAAGATGTT CCTGCTGGCT
GGCCTGATCG ACGCTGCATT CCTGATCGGT GTGGGTGTTG CAATGCTGTT CGCCTTCGCC
AACCCGCTGC TGTCCGTCAT TCAGTAA
 
Protein sequence
MQAYLANIQG LTAIGIGIII GLGAIGACLG IALMGGKYIE ACARQPELMN PLQTKMFLLA 
GLIDAAFLIG VGVAMLFAFA NPLLSVIQ