| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3497 |
|---|
| Symbol | |
|---|
| ID | 4040345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3788932 |
|---|
| End bp | 3789474 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637978914 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_585638 |
|---|
| Protein GI | 94312428 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0214054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.242714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA CCGCAACCAT TGCCCGTCCC TACGCGGAGG CGCTCTTCCG CGTCGCCAGT
GAAGCCGGTG CAGGCAACCT GGGTGCATGG TCCGAGCTGG TGTCGGAAAT GGGGCAGGTT
GCCGCCAATC CCGACATGCA GGCGCTCGCC ACCGACCCGA ACATTTCCGG CGACAAGCTC
GAGGAAGTGT TCCTGTCGGT GCTTAAGAGC CCGGTCAACG ACGAAGCTCG CCGCTTCGTG
AAGCTGCTGG TGGAAAACAG CCGCCTGACA GCGTTGCCGG AAATTGCCGA ACAGTTCCAT
GCGCTCAAGA ACGCCCGCGA GGGCTCGTCC GACGTCGAGA TCACCAGTGC ATTCCCGCTG
GACGCCTCGC AGACGAACGA ACTGGTCGCC GCACTCGAAC GCAAGTTCGG CCGCAAGCTG
TACGCAAAGG TGGCGGTGGA CCCGTCGCTG ATCGGTGGCG TAAGCGTCAA GGTCGGTGAC
GAAGTGCTCG ACACCTCCGT GCGCTCGCGT CTGGCTGCCA TGCAAGCCGC GCTGACCGCC
TGA
|
|---|
| Protein sequence | MAETATIARP YAEALFRVAS EAGAGNLGAW SELVSEMGQV AANPDMQALA TDPNISGDKL
EEVFLSVLKS PVNDEARRFV KLLVENSRLT ALPEIAEQFH ALKNAREGSS DVEITSAFPL
DASQTNELVA ALERKFGRKL YAKVAVDPSL IGGVSVKVGD EVLDTSVRSR LAAMQAALTA
|
|---|
| |