Gene Rmet_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3495 
Symbol 
ID4040343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3786405 
End bp3787280 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID637978912 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_585636 
Protein GI94312426 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.055909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.57378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA CGAAAGAGAT TCGAACCAAG ATCAAGAGCG TGCAAAACAC GCGCAAGATC 
ACCAAGGCGA TGGAGATGGT CGCCGCATCC AAGATGCGCA AGGCGCAGGA ACGGATGCGC
AACGCCCGCC CCTACGCCGA GAAAGTGCGG AATATCGCGG CGCACCTGGC CTCTGCCAAC
CCCGAGTTCA AGCATCCGTT CATGGTGGCA CGCGACGTCA AGCGTGCCGG CATGATCGTG
GTGACGACCG ACAAGGGTCT GTGCGGTGGC CTGAACACCA ACGTGCTGCG CGCGGTGACC
AACGAACTGA AGGACCTGCA GGGCCAGGGC GTGAACGTGC AAGCGACCGC CATCGGTACC
AAGGGCATGC AGTTCCTGGG CCGCATCGGC GCCAAGGTGG TCTCGCATGT GGTGCAGCTG
GGTGACACCC CGCATCTGGA AAAGCTGATC GGCGCGATCA AGGTTCAGCT GGACGCCTAT
ACCAACGGCG AAGTCGACGC GGTGTACTTG GCATATACCA AGTTCATCAA CACGATGAAG
CAGGAGCCGA TGGTCGAGCA ACTGCTGCCG CTGGCAGCGG ACAAGCTGAG CCAGACCGAA
GATGAAAAGC GCGCCTACTC GTGGGATTAC ATCTACGAGC CCGACGCCCA GACCGTTGTG
GAAGAGCTGC TCGTCCGCTA CGTCGAAGCG CTGGTGTACC AGGCCGTGGC CGAGAACATG
GCGTCGGAGC AATCCGCGCG TATGGTGGCC ATGAAGGCTG CATCCGACAA CGCCAAGAAC
GTGATCGGCG AACTGCAACT GGTCTACAAC AAGACCCGTC AGGCAGCGAT TACGAAGGAA
CTGTCGGAAA TCGTCAGCGG TGCCGCTGCG GTCTAA
 
Protein sequence
MAGTKEIRTK IKSVQNTRKI TKAMEMVAAS KMRKAQERMR NARPYAEKVR NIAAHLASAN 
PEFKHPFMVA RDVKRAGMIV VTTDKGLCGG LNTNVLRAVT NELKDLQGQG VNVQATAIGT
KGMQFLGRIG AKVVSHVVQL GDTPHLEKLI GAIKVQLDAY TNGEVDAVYL AYTKFINTMK
QEPMVEQLLP LAADKLSQTE DEKRAYSWDY IYEPDAQTVV EELLVRYVEA LVYQAVAENM
ASEQSARMVA MKAASDNAKN VIGELQLVYN KTRQAAITKE LSEIVSGAAA V