| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3493 |
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| Symbol | atpC |
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| ID | 4040341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3784413 |
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| End bp | 3784829 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978910 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_585634 |
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| Protein GI | 94312424 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000220298 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.513803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCA TTCTTGTAGA CGTCGTCAGC GCGGAAGCGT CGATCTTCTC CGGTCAGGCG
AAGTTCGTGG CGCTGCCGGG CGAGTCGGGT GAACTGGGTA TCCTGCCGGG TCACACGCCG
CTGATTACCC GCATCCAGCC GGGCGCGGTG CGCATCGAGA AGGAAGACGG CGGCGAAGAG
TTCGTGTTCG TTGCCGGCGG CATTCTTGAA GTGCAGCCCC AGCACGTTAC TGTGCTGGCC
GATACCGCGA TTCGCGGTAC GGATCTGGAT GAAGCCAAGG CTAGCGAAGC CAAGCGCGCG
GCCGAGGAAA TGCTGCAGAA TCAGAGCAGC GATCTGGATC TGGCGCGCGC CCAGAGCGAA
CTGGCCGTGG CCGCTGCGCA GCTTGCTGCA ATCGCCCGCC TGCGTCGTAA GAAGTAA
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| Protein sequence | MATILVDVVS AEASIFSGQA KFVALPGESG ELGILPGHTP LITRIQPGAV RIEKEDGGEE
FVFVAGGILE VQPQHVTVLA DTAIRGTDLD EAKASEAKRA AEEMLQNQSS DLDLARAQSE
LAVAAAQLAA IARLRRKK
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