Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3489 |
Symbol | putA |
ID | 4040337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3774558 |
End bp | 3778520 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637978906 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_585630 |
Protein GI | 94312420 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.376631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.245835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA CCACCCTCGG CGTCAAGCTC GACGACGCAT CGCGCGAACG CCTGAAGCGC GTTGCCCAGT CCATCGACCG CACCCCGCAC TGGCTGATCA AGCAGGCCAT CTTCACGTAC CTGGAACAGG TGGAACGCGG CCATCTGCCC CATGAAGCTG GTGCCGGCGC GACTGCAGAT ACCGATGGCG CCGATGCTGG CGACGCGACG CAGGCCGATG CCGCGCCGCA ACCTTTCCTC GAATTCGCGC AGAGCGTCCA GCCTCAGTCG GTACTGCGCG CGGCCATCAC GTCCGCCTAC CGCCGTCCGG AAACCGAATG TGTGCCGGTG CTGCTGGAGC AGGCGCGCCT GCCGCAGGCG CAGGCCGATG CCGCCATCAA GATGGCGCGA GCCCTGGCGG CCCGGCTGCG TGAGCAGAAA GTAGGCAGCG GACGCGAGGG GCTGGTGCAG GGGCTGATCC AGGAGTTCTC GTTGTCGTCG CAGGAAGGCG TGGCGCTGAT GTGCCTGGCC GAAGCGCTGC TGCGCATCCC CGACAAGGCC ACGCGCGATG CGCTGATCCG CGACAAGATC AGCGGCGCCA ACTGGCAATC ACATCTGGGC CAGAGCCCGT CGCTGTTCGT CAACGCTGCC ACCTGGGGCC TGCTGCTGAC CGGCCGGCTG GTGGCCACGC ACACCGAAGC CGGACTGTCG AAGGCGCTGA CGCGCATCAT CGGCAAGGGC GGCGAGCCGT TGATCCGCAA GGGCGTGGAC ATGGCGATGC GCCTGATGGG CGAGCAGTTC GTGACTGGCG AAACAATCTC CGAGGCGCTG GCCAACGCGC GCAAGTACGA GGAAGAGGGC TTCCGTTACT CGTATGACAT GCTCGGCGAA GCGGCGATGA CCGAGGCCGA TGCCCAGCGC TACCTGGCGT CCTACGAGCA GGCGATCCAC GCGATCGGGC AGGCTTCGCG CGGCCGTGGC ATCTACGAAG GCCCAGGCAT CTCGATCAAG CTATCCGCGC TGCACCCGCG CTACAGCCGC GCGCAGCACG AGCGCGTGAT CACCGAACTC TACGGTCGCC TGAAGAGCCT GACGATGCTG GCCCGCCAGT ACGACATCGG TATCAACATC GACGCCGAGG AAGCGGACCG CCTGGAAATC TCGCTCGACC TGCTTGAGCG GCTCTGCTTC GAGCCGGAGC TGGCCGGTTG GAACGGCATC GGCTTCGTGG TGCAGGGCTA TCAGAAGCGC TGCCCGTTCG TGATCGATTA TCTGATCGAC CTGGCGCGCC GTAGCCGGCA TCGCCTGATG ATCCGCCTGG TCAAGGGTGC GTACTGGGAC AGCGAGATCA AGCGCGCCCA GGTCGACGGC CTGGAGGGCT ACCCGGTCTA CACGCGCAAG GTCTACACCG ATGTGTCGTA TGTGGCCTGC GCCCGCAAGC TGCTGTCGGT GCCCGACGCG ATTTATCCAC AGTTCGCCAC CCACAACGCC CACACGCTGG CAGCCATCTA CCAGATCGCC GGCCAGAACT ATTACCCCGG CCAGTACGAA TTCCAGTGCC TGCATGGCAT GGGCGAGCCG CTGTACGACC AGGTGGTCGG CCCGGTGGCG GATGGCAAAT TCAACCGGCC GTGCCGGATC TACGCGCCGG TCGGCACCCA CGAAACGCTG CTGGCATACC TGGTGCGCCG CCTGCTCGAG AACGGCGCCA ACACCTCGTT CGTGAACCGG ATCGCCGACG AGACGATCGC GCTCGACGAT CTCGTCGCTG ACCCGGTGGC CGTGGTCGAA ACCATGCACA AGACAGAGGG CGTGCTTGGC CTGCCGCATC CGCGTATCCC GCAGCCGCGC GCGCTGTATG GCAAATCGCG CGCCAATTCG GCCGGCATCG ACCTGTCGAA TGAACATCGG TTGGCGTCGC TGTCGTCCGC ACTGCTGGCC GGCACCAGCG AGACGCCGCG CGCGGAACCG CTGCTCGGCG CCGCAGTGGC GGGCACGGAT GCCACGTCCG AGCCGGTACT GAATCCGGCG GATCGTCGCG ACGTAGTGGG GCAGGTCAGC GAGGCAACGC CGGCTGAGAC CGAAGCCGCG CTTGTGGCCG CCGTCAACGT GGCGCCGATC TGGCAGGCCA CGCCGCCCGA AGTGCGTGCC GCCGCGCTGG AACGCGCCGC CGATCTGATG GAAGCCCAGA TGCAGTCGCT GATGGGCATC ATCATGCGCG AGGCCGGCAA GACGTTTTCG AACGCCATCG CCGAAGTGCG CGAGGCGGTC GACTTCCTGC GCTACTACGC GGTGCAGGTC CGCGCGTCGT TCTCGAACGA TACCCATCGC CCCCTTGGTC CGGTGGTCTG CATCAGCCCG TGGAATTTCC CGCTGGCGAT CTTCACCGGC CAGGTGGCCG CCGCGCTGGC AGCCGGGAAT CCGGTGCTGG CCAAGCCGGC CGAACAGACG CCGCTGATCG CCGCCGCCGC CGTGCGTCTG CTGCGCGACG CCGGTGTGCC CGCAGCCGCG GTGCAATTGC TGCCGGGCCG GGGCGAGACC GTCGGCGCGG CGCTGGTAGG CGACGCCCGG GTCAAGGGCG TGATGTTCAC CGGCTCGACC GAAGTTGCCC GCCTCCTGCA ACGCAACGTG GCGAGCCGTC TCGATGCCGC GGGCCGTCCG ATTCCGCTGA TCGCCGAGAC GGGCGGGCAG AACGCGATGA TCGTCGATTC CTCGGCGCTG GCCGAGCAGG TGGTGGGCGA CGTGGTGACT TCGGCCTTCG ATTCGGCCGG CCAGCGCTGT TCGGCGCTGC GCGTGCTGTG CCTGCAGGAA GACGTGGCCG ACCGCATCCT GGAAATGCTC AAGGGTGCGA TGGGTGAGTT GACGCTGGGC AACCCGGATC GCCTCTCCAC TGACGTTGGT CCTGTGATCG ACGAGGAAGC GCGCGGCAAT ATCCTGCGCC ATATCGAAGC GATGCGGGCC AAGGGCCGTC GTGTGCACCA GGCCGACCCG GGCGCGGCGG ACACGCCGGC CTGCCGCCAT GGCACGTTCG TGCCGCCGAC GCTGATCGAA CTCGATTCGA TCGCGGAGCT GAAGCGGGAG GTGTTCGGTC CGGTGTTGCA TGTGGTGCGC TTCCCGCGAA CCGCGCTGGA CAAGCTGATC GACCAGATCA ATGGCACTGG GTATGGCCTG ACGCTCGGCG TCCACACGCG GATCGACGAG ACGATCGCGC ACATCGTCGA CCGCGCGGAT GTGGGCAATC TCTATGTGAA CCGGAATGTC GTCGGCGCCG TGGTGGGCGT GCAGCCATTC GGTGGCGAAG GGCTGTCCGG CACGGGGCCG AAGGCGGGAG GGCCACTCTA TCTGCACCGG CTGCTGTCGG TCTGCCCGCA GGATGCCGTG GCGCGCGCCG TGCGTGCGTC GGATGCGACT GGTGGCGTGG CCGCCGCGCC GGTGTCGCCC GAACTGGCCG CGCTGAAGGC CTGGGCGCAG GCGTCGCTGC CCGAGGTGGC CGAGGCCTGC GATCGCCTGG CCGCGGCATC GCCGTCGGGG CTCGGTGTGA CGCTGCCGGG TCCTACCGGC GAGCGCAACA CCTACTCGCT GCTGCCGCGC GAGCGTGTGC TTTGCCTCGC CCAGCAGGAG TCCGATCTGG TGCTGCAACT GGCCGCCGTG CTGGCCGTCG GCAGCGAGGC GTTGTGCGTT GACACAGCGC AGACCAGGGC CCTGTCTGAA AGGCTTCCCG CCGCAGTACA ATCGCGCGTC CGCATGGTTT CCGACTGGAC GTCGACGGAT ACGGCATTCG ATGCCGTGCT GCACCACGGC GATTCCGACC AGCTTCGCAC GGTTTGCGAG CAGGTGGCCA CCCGCACTGG TCCGATCGTC GGCGTGCAGG GCCTTGCGCA CGGTGAACCG AATATCGCTC TGGAGCGTTT GTTGATCGAA CGTTCGCTGT CCGTCAATAC GGCGGCCGCG GGCGGCAATG CAAGTTTGAT GACGATCGGC TGA
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Protein sequence | MATTTLGVKL DDASRERLKR VAQSIDRTPH WLIKQAIFTY LEQVERGHLP HEAGAGATAD TDGADAGDAT QADAAPQPFL EFAQSVQPQS VLRAAITSAY RRPETECVPV LLEQARLPQA QADAAIKMAR ALAARLREQK VGSGREGLVQ GLIQEFSLSS QEGVALMCLA EALLRIPDKA TRDALIRDKI SGANWQSHLG QSPSLFVNAA TWGLLLTGRL VATHTEAGLS KALTRIIGKG GEPLIRKGVD MAMRLMGEQF VTGETISEAL ANARKYEEEG FRYSYDMLGE AAMTEADAQR YLASYEQAIH AIGQASRGRG IYEGPGISIK LSALHPRYSR AQHERVITEL YGRLKSLTML ARQYDIGINI DAEEADRLEI SLDLLERLCF EPELAGWNGI GFVVQGYQKR CPFVIDYLID LARRSRHRLM IRLVKGAYWD SEIKRAQVDG LEGYPVYTRK VYTDVSYVAC ARKLLSVPDA IYPQFATHNA HTLAAIYQIA GQNYYPGQYE FQCLHGMGEP LYDQVVGPVA DGKFNRPCRI YAPVGTHETL LAYLVRRLLE NGANTSFVNR IADETIALDD LVADPVAVVE TMHKTEGVLG LPHPRIPQPR ALYGKSRANS AGIDLSNEHR LASLSSALLA GTSETPRAEP LLGAAVAGTD ATSEPVLNPA DRRDVVGQVS EATPAETEAA LVAAVNVAPI WQATPPEVRA AALERAADLM EAQMQSLMGI IMREAGKTFS NAIAEVREAV DFLRYYAVQV RASFSNDTHR PLGPVVCISP WNFPLAIFTG QVAAALAAGN PVLAKPAEQT PLIAAAAVRL LRDAGVPAAA VQLLPGRGET VGAALVGDAR VKGVMFTGST EVARLLQRNV ASRLDAAGRP IPLIAETGGQ NAMIVDSSAL AEQVVGDVVT SAFDSAGQRC SALRVLCLQE DVADRILEML KGAMGELTLG NPDRLSTDVG PVIDEEARGN ILRHIEAMRA KGRRVHQADP GAADTPACRH GTFVPPTLIE LDSIAELKRE VFGPVLHVVR FPRTALDKLI DQINGTGYGL TLGVHTRIDE TIAHIVDRAD VGNLYVNRNV VGAVVGVQPF GGEGLSGTGP KAGGPLYLHR LLSVCPQDAV ARAVRASDAT GGVAAAPVSP ELAALKAWAQ ASLPEVAEAC DRLAAASPSG LGVTLPGPTG ERNTYSLLPR ERVLCLAQQE SDLVLQLAAV LAVGSEALCV DTAQTRALSE RLPAAVQSRV RMVSDWTSTD TAFDAVLHHG DSDQLRTVCE QVATRTGPIV GVQGLAHGEP NIALERLLIE RSLSVNTAAA GGNASLMTIG
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