| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3488 |
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| Symbol | |
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| ID | 4040336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3773252 |
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| End bp | 3774403 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978905 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_585629 |
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| Protein GI | 94312419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.761675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA CATTCCGCAA GACGGCGATG ACCGTTGCCA TGGCCGTAGC CGGCCTGACC
GCCGCCTCGG CCGCATTTGC CCAGGCGCAG GAAATCAAGC TGGGCTTTGC CGGCCCGATG
ACCGGTGGCC AGGCGCAGTA TGGCAAGGAC ATGCAGAACG GTATCGTCCT CGCCATCGAG
GACATGAACG CCACCAAGCC CAAGATTGGC GGCAAGGACG TCAAGTTCGT GCTGGTCTCC
GAGGACGACC AAGCCGACCC GAAGACCGGT TCCGTAGTGG CGCAGAAGCT CGTGGACGCG
GGCATCCAGG GCATGCTCGG CCACTTCAAC TCGGGCACCA GCATCCCGGC GTCGATGGTC
TACAACCGCG CCGGCATTCC GCAGATCGCC ATGGCCACGG CGCCTGAGTA CACCCGCCAG
GGCTTCAAGA CCACGTTCCG CATGATGACG TCCGACACCC AGCAGGGTTC GGTGATCGGC
GCCTTCGTGG TGAAGAAGCT CGGCGCCAAG AACATCGCCA TCGTCGATGA CCGCACGGCC
TACGGCCAGG GTCTGGCCGA CGAGTTCGAG AAGGCGGCCA AGGCCGCTGG CGGCAAGATC
GTCCGCCGTG AGTTCACGAA CGACAAGGCC GTGGACTTCA AGGCCGTGCT GACCAACATC
AAGCGCGCCA ACCCGGACAT CATCTTCTAC GGCGGCGCCG AGACGCAGTC GGCCCCGATG
GCCAAGCAGG TGAAGGAACT GGGCATGAAG GCGCCGCTGG TGTCGGGCGA AATGTCCAAG
ACCGACAACT TCCTGAAGCT GGCCGGCCCG GCAGCCGATG GCACCGTGGT GTCGCTGGCC
GGCCTGCCGC TGGACCAGAT GCCGGGTGGC GTGGCCTATG AGAAGAAGTA CGAGAAGCGC
TTCGGCTCGA AGGTGCAGAC CTACTCGCCG TATGCCTATG ACGGCGCCAC CGCGATGATG
ACGGCCATGA TCAAGGCCGG CTCGGCCGAT CCGGCGCGCT ACCTGCCGGT GCTGGCTGCG
ACCAACATGC AGGGCGTGAC CACCAAGACG CTGGCCTACG ATGCCCGCGG CGACCTGAAG
GACGGCGGCA TCACCGTCTA CAAGGTGGCT GACGGCAAGT GGACCGTGCT GCAGACCGTG
GGCGGCAAGT AA
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| Protein sequence | MSSTFRKTAM TVAMAVAGLT AASAAFAQAQ EIKLGFAGPM TGGQAQYGKD MQNGIVLAIE
DMNATKPKIG GKDVKFVLVS EDDQADPKTG SVVAQKLVDA GIQGMLGHFN SGTSIPASMV
YNRAGIPQIA MATAPEYTRQ GFKTTFRMMT SDTQQGSVIG AFVVKKLGAK NIAIVDDRTA
YGQGLADEFE KAAKAAGGKI VRREFTNDKA VDFKAVLTNI KRANPDIIFY GGAETQSAPM
AKQVKELGMK APLVSGEMSK TDNFLKLAGP AADGTVVSLA GLPLDQMPGG VAYEKKYEKR
FGSKVQTYSP YAYDGATAMM TAMIKAGSAD PARYLPVLAA TNMQGVTTKT LAYDARGDLK
DGGITVYKVA DGKWTVLQTV GGK
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