| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3483 |
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| Symbol | |
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| ID | 4040331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3766364 |
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| End bp | 3767740 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978900 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_585624 |
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| Protein GI | 94312414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGTCA GCGTCTTCGA TCTGTTCAAG GTGGGCATTG GCCCGTCCAG TTCGCACACC
GTCGGCCCGA TGCGCGCCGC CCTGATGTTT GCCCACGGGC TGGAGCGTGA CGGGCTGCTG
CCGCAGGTGG CAAGTGTGCG CGTGGAGTTG TATGGCTCGC TGGGTGCGAC GGGCAAGGGA
CACGGCACCG ACAAGGGCGT GATCCTGGGC CTGATGGGGG AAGCGCCGGA CACGGTCGAC
CCGAACACCA TCGACGCCAA GCTCGCCGCG CTACGCGCGA GCCGCCAGCT CTCGCTGCTC
GGCACGCATA CGGTGCCATT CGTAGAACGC GAACACATCG CGTTCTATCG TCGCGAGGCG
ATGGCCGAGC ATCCCAACGG GATGAAATTC CACGCCTACG ATACGGACGG CACCTCACTA
CGCGAGGCCC GCTATCTGTC CGTGGGTGGT GGCTTCATCG TCACGGCGGG CTCACCTAAC
ACGCAGTTGC AAGCGGCCGA GCGCCAGTTG CCGCATCCGT TCCGCAGCGG ACGCGCGATG
CTCGACATGG CTCACGCCAG CGGCAAGTCG ATTGCCCGGC TCATGCTGGA GAACGAACTC
ACGTGGCGCT CCGAGCAGGA GGTCATGGAC GGCCTGCTCC ACATCTGGGA CGTGATGCAG
CAATGCGTGG CACGCGGGTG CCGCACCGAT GGCGAACTGC CCGGGCCATT CAAGGTGCGC
CGCCGCGCGC CCGAGCTGTA TCGCAACCTG ACGGAGCGCG CCGAGCGCAC CCTTTCCGAT
CCGCTTTCGG TCATGGACTG GGTCAACCTG TACGCAATCG CCGTCAACGA AGAAAACGCG
GCGGGTGGCC GCGTGGTCAC GGCGCCCACC AATGGCGCGG CCGGCATCAT TCCGGCGGTG
CTGCACTACT ACGACCGCTT CATTCCGGGC GCGAACCCAC AGGGCGCAGT GGACTTCCTG
CTGACGGCAG GCGCGATCGG TCTGCTCTAC AAGCTCAACG CGTCGATCTC CGGCGCGGAG
GTCGGATGCC AGGGTGAAGT CGGCGTGGCC TGTTCGATGG CGGCCGGTGC GCTGGCGGCC
GTGCTCGGGG GCACGCCCGA GCAGGTGGAA AACGCCGCCG AGATCGGCAT GGAGCACAAC
CTCGGCCTGA CCTGCGACCC CGTGGGCGGA CTGGTGCAGA TTCCCTGCAT CGAGCGCAAT
GCCATGGCGG CGGTCAAGGC GGTCAATGCG GCGCGCATGG CCCTGCGCGG CGACGGCACG
CACTACGTCT CGCTCGACTC GGTCATCAAG ACCATGCGCG AAACTGGCGC GGACATGAAG
ACCAAGTACA AGGAAACCGC GCGAGGCGGC CTGGCGGTCA ATATCGTGGA GTGCTGA
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| Protein sequence | MAVSVFDLFK VGIGPSSSHT VGPMRAALMF AHGLERDGLL PQVASVRVEL YGSLGATGKG
HGTDKGVILG LMGEAPDTVD PNTIDAKLAA LRASRQLSLL GTHTVPFVER EHIAFYRREA
MAEHPNGMKF HAYDTDGTSL REARYLSVGG GFIVTAGSPN TQLQAAERQL PHPFRSGRAM
LDMAHASGKS IARLMLENEL TWRSEQEVMD GLLHIWDVMQ QCVARGCRTD GELPGPFKVR
RRAPELYRNL TERAERTLSD PLSVMDWVNL YAIAVNEENA AGGRVVTAPT NGAAGIIPAV
LHYYDRFIPG ANPQGAVDFL LTAGAIGLLY KLNASISGAE VGCQGEVGVA CSMAAGALAA
VLGGTPEQVE NAAEIGMEHN LGLTCDPVGG LVQIPCIERN AMAAVKAVNA ARMALRGDGT
HYVSLDSVIK TMRETGADMK TKYKETARGG LAVNIVEC
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