| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3478 |
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| Symbol | |
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| ID | 4040324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3758541 |
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| End bp | 3760628 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978895 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_585619 |
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| Protein GI | 94312409 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACG GGCTCAATTC CGCGCAATCC GAAGCCGTTC GCTATTTCGA CGGGCCATGC
CTCGTCCTGG CGGGTGCCGG ATCGGGCAAG ACGCGCGTGA TCACGCAGAA GATCGCGCAC
CTGATCGAGG ACAAGGGGTT CGAGCCGCGC CACATCGCCG CCGTCACGTT CACCAACAAG
GCGGCCAAGG AGATGCAGGA GCGCATCGGC AAGCTGATGG AGGGCAAGAC CACGCGCGAG
GGCAAGCGGA TTCCGCTCAA GCAGCTCACG GTCTGCACGT TCCATTCGCT CGGCGTGCAG
ATCCTGCGCA TGGAAGCCGA GCACCTTGGC CTGAAGCCGC AGTTCTCGAT CATGGATTCC
GATGACTGCT TCGGCCTGGT GCAGGAGCAG CTTGGCACCA CGGACAAGAA GCTGATCCGC
AGCGTGCAGG GCACGATCTC GCTGTGGAAG AACGGCATGA TCGATCCGGA GACGGCGCTC
GCGCAGGCGA GCGATGCCGA CGAGCACCAG GCCGCGATGG TGTATCGCAA TTACGTGGCC
ACGCTGCACG CGTACCAGGC GGTGGACTTC GACGACCTGA TCCGCCTGCC CGCCGAATTG
TTCGCGCGCG ACGAAGCCGT GCAATTGAAG TGGCAGAACC GCCTGCGCTA CTTCCTCGTC
GACGAATACC AGGACACCAA CGCGTGCCAG TACCAGTTGC TCAAGCTGCT GGCCGGTGGC
TCGCATCTGC GCGCGCCGGC GTTCACCGCA GTGGGTGATG ACGATCAGGC GATCTATGGT
TGGCGTGGCG CCACGCTCGA CAACCTGCGC CTGCTGCAGA CCGATTTTCC GAGTCTGAAG
GTGGTCAAGC TCGAACAGAA CTACCGTTCG ACCGTGCGGA TTCTGGAAGC CGCCAACGCG
GTGATCGCCA ACAACCCGAA GCTGTTCGAC AAGAAGCTGT GGTCGGAACA CGGCATGGGC
GATCCGATCG CGATCCACCC GATGAACGAC GAGGAGCACG AGGCAGAGTC AGTGGTATTC
CGGCTGTCCG CGCACAAGTT CGAGCGGCGC GCGCAGTTCC GTGACTACGC AATCCTTTAT
CGCGGCAATC ACCAGGCCCG GCTGTTCGAA CAGATCCTGC GCCGCGAGCG CATTCCGTAT
GTGCTCTCGG GCGGTCAGAG CTTCTTCGAC AAGGCCGAGA TCAAGGACAT CTGCGCGTAC
CTGCGCCTGA TCGCCAACCC CGACGACGAT CCCGCATTCA TCCGCGCGAT CACCACGCCG
CGTCGTGGCG TGGGCAACAC CACGCTCGAA GTGCTCGGCA CGTTCGCGGG CCAGGCCAAG
GTATCGCTGT TCGAGGCGGC CATGATGGGT GGCATCGAGG CGAAGCTGCA GCCGCGCCAG
CTTGAGCCGC TGCGCACGTT CTGCGAGTCG ATGGTACGGC TGGCCGATCG TGCGAAGACA
GACCCGGCCA CGGTGGTGCT CGACGATCTC ATGGAAGGCA TCCACTACGA GGCCTACCTC
TACGACACCT TCGACGAACG GCAAGCGCAA TCGCGCTGGA CCAACACGCT CGAATTCCTC
GACTGGCTCA AACGCAAGGG CACGCGTCCC GAGCCGGAAG GCGAGGGCGA AGCCACCGGA
TTCGACACCG CCGATGGTTT CGGCGACGAA GGCAAGAACC TGCTCGAGCT TACGCAGACC
GTGGCGCTGA TGAGCATGCT GGAAGGCCGC GAGGAAGATC CCGATGCGGT GCGACTGTCG
ACGCTGCACG CGTCGAAAGG GCTCGAGTAT CCGCACGTGT TCCTGGTCGG CGTGGAGGAG
GGCATCCTGC CTCACTCGCG CGAGGACGAG GAAATGGGCG ACGAGAAGAT CGAGGAGGAG
CGCCGCCTGA TGTATGTGGG CATCACGCGC GCGCAGCGCA GTCTGCAGAT CAGCTGGTGC
AGGAAGCGCA AGCGCGCCCG CGATACGTAT GCGTGCGAGC CGTCGCGTTT CATCGCCGAG
ATGAAGCTCG AGGACAGTCC CGCCCCGAAG GACGAGACTC CGGCCATGAG CCCGAAGGAT
CGTCTGGCCG GGCTCAAGGC GCTGCTCGGC AAGCCTGCGG CGGAATGA
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| Protein sequence | MSHGLNSAQS EAVRYFDGPC LVLAGAGSGK TRVITQKIAH LIEDKGFEPR HIAAVTFTNK
AAKEMQERIG KLMEGKTTRE GKRIPLKQLT VCTFHSLGVQ ILRMEAEHLG LKPQFSIMDS
DDCFGLVQEQ LGTTDKKLIR SVQGTISLWK NGMIDPETAL AQASDADEHQ AAMVYRNYVA
TLHAYQAVDF DDLIRLPAEL FARDEAVQLK WQNRLRYFLV DEYQDTNACQ YQLLKLLAGG
SHLRAPAFTA VGDDDQAIYG WRGATLDNLR LLQTDFPSLK VVKLEQNYRS TVRILEAANA
VIANNPKLFD KKLWSEHGMG DPIAIHPMND EEHEAESVVF RLSAHKFERR AQFRDYAILY
RGNHQARLFE QILRRERIPY VLSGGQSFFD KAEIKDICAY LRLIANPDDD PAFIRAITTP
RRGVGNTTLE VLGTFAGQAK VSLFEAAMMG GIEAKLQPRQ LEPLRTFCES MVRLADRAKT
DPATVVLDDL MEGIHYEAYL YDTFDERQAQ SRWTNTLEFL DWLKRKGTRP EPEGEGEATG
FDTADGFGDE GKNLLELTQT VALMSMLEGR EEDPDAVRLS TLHASKGLEY PHVFLVGVEE
GILPHSREDE EMGDEKIEEE RRLMYVGITR AQRSLQISWC RKRKRARDTY ACEPSRFIAE
MKLEDSPAPK DETPAMSPKD RLAGLKALLG KPAAE
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