Gene Rmet_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3477 
Symbol 
ID4040323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3757485 
End bp3758270 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID637978894 
Producttwo component transcriptional regulator 
Protein accessionYP_585618 
Protein GI94312408 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTGCTC CATCCGGCCG CGGTTCCGCG GCCGTTCCCA TCCGCAAGCT CGCCATGGAC 
CTGTCCCCCG CTCTGCCAAT CCGCCTGCTG ATCGTCGACG ACGACCCACA AATCCGGGCC
ATGCTGGCCG AATACCTCGC CACATTCGGC ATGGAGGCCG AAGGTGCCGA AGGCGGCACT
GCCATGCGTG CGGCGATGTC GAAGCAGGAA TACGACCTCG TCATCCTGGA TCTCTCGCTG
CCCGGCGAGA ACGGCCTGAC GTTGTGCCGC GAAATCCGGG AGTCCAGCAA CCTGCCTGTG
ATCATGCTGA CCGCCCGCGC GGAACTGGCC GATCGCGTGG TGGGACTCGA GGTGGGCGCG
GACGACTACG TGACCAAGCC GTTCGAGATG CGCGAGCTGG TGGCGCGCAT CCATACCGTG
CTGCGTCGCA GCCGTGCCGA CGTGCGACGT CCGGCGCCGG CTGCGCCCGG GCATGAAGTC
CGGTTCGCGG CATGGCGACT GAACACCACG CTGCGCCAGC TGGTGGATGC CGAGGACACG
GTGGTGCCGC TTTCCAACGC GGAATTCCGG CTGCTGCTGA CATTCATCGA GCATCCCAAT
CGCGTGCTCG ATCGCGAGAT GCTGATCAAC ACCGCGCGTG GACGCGATCT GGACGTGTTC
GATCGCAGCA TCGACCTGCT GGTGTCCCGT CTGCGCCAGA AGCTGCGTGA CGATCCGCGC
GACTCGGCAC TGATCCGCAC CGTGCGTGGC GAAGGGTACG TCTTCACGGG CACCGTGGAG
CACTGA
 
Protein sequence
MGAPSGRGSA AVPIRKLAMD LSPALPIRLL IVDDDPQIRA MLAEYLATFG MEAEGAEGGT 
AMRAAMSKQE YDLVILDLSL PGENGLTLCR EIRESSNLPV IMLTARAELA DRVVGLEVGA
DDYVTKPFEM RELVARIHTV LRRSRADVRR PAPAAPGHEV RFAAWRLNTT LRQLVDAEDT
VVPLSNAEFR LLLTFIEHPN RVLDREMLIN TARGRDLDVF DRSIDLLVSR LRQKLRDDPR
DSALIRTVRG EGYVFTGTVE H