| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3461 |
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| Symbol | |
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| ID | 4040306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3737236 |
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| End bp | 3738747 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978877 |
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| Product | spermidine synthase |
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| Protein accession | YP_585602 |
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| Protein GI | 94312392 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACC GTACCCTAGT CCTTTCGGTG TTGATCGTAG CCTCCTGCGG GCTTGGCTAC
GAACTGATTG CCGGCGCCCT GTCGAGCTAT CTGCTCGGCG ATTCGATCCT CCAGTTCTCC
TCGATCATCG GCTGCTACCT GTTTGCGATG GGTGTCGGCT CGTGGCTCTC GCGCTACGTG
AAGGACGAGG ACGTCCTGAC CCGCTTCATC GACATCGAGA TCCTTGTCGG CCTGCTCGGT
GGCATCTCGG CGGCGCTGCT GTTCGTGGTA TTCGCCTGGC TCTCCGCGCC ATTCCGCACC
GCGCTGTATG CGCTGGTGTT CGTGATCGGG ATGCTGGTCG GCATGGAGAT TCCGCTGGTC
ATGCGCATCC TCAATGCGCG GCGTGCCCAG TTCAGCGATC TGGTGAGCCG CGTGCTCACG
TTCGACTATC TCGGCGCGCT GGCAGTGTCG CTGGTATTCC CGCTGGTGCT CGCGCCACGG
CTCGGGCTGT CGCGCACGGG ATTCCTGTTC GGCATGCTCA ACGTCGCGGT GGCGCTGTTC
ACACTGCGCA TCTTCCGCGA CGAGGTGTCG CGCACGACGT TGCGCACGCT GCGCGCAGGC
ATGGTGCTGG CGGTGCTGAC AGTCGGCTTC GCCGGTTCGA ACTATCTGAC GCACTGGGCC
GAGCGCGGCC TGTTCGGCGA CGAGATCATC CATAGCGAAA CCACCCCGTA CCAGCGGCTG
GTCATCACGC GCTGGAAGGA CGATCTCCGC CTCTACATCA ACGGCAATCT GCAGTTTTCC
TCGCGCGACG AACACCGCTA TCACGAAGCG CTAGTGCACC CGGTGCTGCA GGCGCTGCCG
TGGGCGCGTC GCGTGCTGGT AATCGGTGGC GGCGATGGGC TGGCGCTGCG CGAGATTCTC
AAGTACCGCA ATATCGAGCA CGTCACGCTG GTCGACCTGG ACCCGGCGAT GACCACGCTA
TTCTCGCGCA GCGAACCGCT ACGGGCACTG AACCACGGCT CGCTGACCGA CCAGCGCGTG
ACAGTGGTCA ACGCCGATGC CGCGCAATGG CTCGAGCAGA ACCAGGACAG CTTCGACGCG
ATCATCGTCG ACCTGCCTGA CCCGTCCAAT TTCGGGCTCG GCAAGCTGTA TTCCGTGCCG
ATGTACCGGC TGATGTCGCG CCATCTGGCC GAGAAGGGCT ACGCGGTGGT GCAGTCGACA
TCGCCCTACT ACGCACCGCG CTCGTTCTGG GACATCGACG CCACGCTGCG TGAAGCCGGG
CTGCATACGT GGCCGTACCA TACCTACGTG CCGTCGTTCG GCGAGTGGGG CTACATCCTG
GTCGGCAAGC GCAACGACTA CACGCCGCCG ACGCGCTACG ACGTGCCGAT GAAGTTTCTC
GACGGGGATA CGACTGCGCT GATGTTCCGT TTTCCCGCCG ACATGGCGCC GCGCCAGGGC
GAGCCGAACC GGCTCAATGA ACAAACTCTC GTGCACGACT TCGAGCGTGA CTGGCGCAAT
GTCATCCGCT AA
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| Protein sequence | MRDRTLVLSV LIVASCGLGY ELIAGALSSY LLGDSILQFS SIIGCYLFAM GVGSWLSRYV
KDEDVLTRFI DIEILVGLLG GISAALLFVV FAWLSAPFRT ALYALVFVIG MLVGMEIPLV
MRILNARRAQ FSDLVSRVLT FDYLGALAVS LVFPLVLAPR LGLSRTGFLF GMLNVAVALF
TLRIFRDEVS RTTLRTLRAG MVLAVLTVGF AGSNYLTHWA ERGLFGDEII HSETTPYQRL
VITRWKDDLR LYINGNLQFS SRDEHRYHEA LVHPVLQALP WARRVLVIGG GDGLALREIL
KYRNIEHVTL VDLDPAMTTL FSRSEPLRAL NHGSLTDQRV TVVNADAAQW LEQNQDSFDA
IIVDLPDPSN FGLGKLYSVP MYRLMSRHLA EKGYAVVQST SPYYAPRSFW DIDATLREAG
LHTWPYHTYV PSFGEWGYIL VGKRNDYTPP TRYDVPMKFL DGDTTALMFR FPADMAPRQG
EPNRLNEQTL VHDFERDWRN VIR
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