| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3449 |
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| Symbol | |
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| ID | 4040294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3725271 |
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| End bp | 3726086 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978865 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_585590 |
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| Protein GI | 94312380 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTTT TTCCCAGACA CCGAGAGAGA CAAACAATGC CAAAGCTCGC AGCAAACCTG
ACGATGCTGT TTAACGAAGT CGGCTTCCTG GACCGCTTCG AGGCCGCCGC CCGCGCCGGA
TTCCGTGGCG TGGAGTTCCT GTTTCCGTAC GCGTTTCACG CCGACCAGAT CGCTGATCGC
CTGAACCGCT TCCAGCTCGA CCTCGTGCTG CACAACCTGC CCGCCGGAAA GTGGGAAGCG
GGTGAGCGCG GCATCGCCTG CCACCCGGAC CGCGTGGGCG AATTCCAGGA CGGCGTGGGC
GAGGCCATCA AGTACGCGAA GGTACTGGGC GTGCGCCAGT TGAACTGTCT GGTCGGCATC
CTGCCGCAGA ACGTGAAGCG CGAACAGGCG CAGGAAACGC TGGTGGAAAA CCTGCGTTTC
GCGGCCAATG CGCTGGCGCA GGAACATATC GATCTGCTGG TTGAACCGAT CAACACGTTT
GACATCCCGG GCTTCTTCCT GTCGCGCACG CAGCAGGCGA TCGACCTGAT TGGTCAGGTC
AACGCGCCCA ACCTCTACGT GCAGTACGAC ATCTATCACA TGCAGCGCAT GGAGGGCGAG
ATCGCCAATA CGATCCGCGC CAACCTGCCG AAGATCAAGC ACGTGCAGCT TGCCGACAAC
CCCGGCCGCA ACGAGCCCGG CACCGGCGAG ATCAATTACC AGTACCTGTT CCGCTTCCTC
GACGAGATCG GCTACCAGGG CTGGATCGGC TGCGAATACA AGCCGAAGAC GACCACCGAA
GCCGGCCTGG GCTGGCGCGC GGCGCACGGC GTTTGA
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| Protein sequence | MAVFPRHRER QTMPKLAANL TMLFNEVGFL DRFEAAARAG FRGVEFLFPY AFHADQIADR
LNRFQLDLVL HNLPAGKWEA GERGIACHPD RVGEFQDGVG EAIKYAKVLG VRQLNCLVGI
LPQNVKREQA QETLVENLRF AANALAQEHI DLLVEPINTF DIPGFFLSRT QQAIDLIGQV
NAPNLYVQYD IYHMQRMEGE IANTIRANLP KIKHVQLADN PGRNEPGTGE INYQYLFRFL
DEIGYQGWIG CEYKPKTTTE AGLGWRAAHG V
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