Gene Rmet_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3432 
Symbol 
ID4040277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3709749 
End bp3710504 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID637978848 
Productrare lipoprotein A 
Protein accessionYP_585573 
Protein GI94312363 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.113167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCC AGCCCGCACT CCGCCCGGAG TCCGTGCGCA CGATAGCGCC CGGCTCCACA 
CGCTTCCTTC GTCAATGCGC GATCATCGTA TCGGCGTTGG TGATGGCCGC GTGCGCGACG
CCGCCGGGCG GCGACACCGA GAACGCATCG ACGCAAGGCG CGATCCCGAC CAAGTCCGCA
CGGTCGAAGT CCGGCACGAA CGCGCCGGCG ACGGCCAAGT CCGACGATCG CGGTAGCTGG
AACCTGTTCG GCCTCGATGA AGGCGCGCCG GCGCAATCGT CGATCGACGG CCTGCGCGCG
GACATGGGTA CGTTCGAGCA GCGTGGCACG GCATCCTGGT ACGGCAAGGG CTTTCACGGC
CGCAAGACCG CCAATGGCGA ACGCTTCGAC ATGCGCGCCA TGACGGCGGC TCACCCGACC
CTGCCGCTAG ACAGCTGGGT GCTGGTGCGC AATCTCAGCA ACAACAAGGT GGCCGTGGTG
CGGATCAACG ACCGTGGCCC CTATCATGGC AACCGGATCC TCGACCTGTC GTACGCGGCA
GCCAAGCGCC TGAGCTTCGT CAATAGTGGC TCGACCAAGG TGGAAATCCG CCGGCTGTCC
CGCACCGAAG TGGCGGCCCT GGGCCCCGAG ATCGAGGCGG GTGGCACCGA GGCCGGCGAT
GGCAGCGGCG CCGACGAGAT GCCGGATACC GCCAATGCGC TGGTGCCGAC GAAGTCGAAG
GCCAGGAAGT CCACGGTCAA GCGCAAGCGC CCCTGA
 
Protein sequence
MFSQPALRPE SVRTIAPGST RFLRQCAIIV SALVMAACAT PPGGDTENAS TQGAIPTKSA 
RSKSGTNAPA TAKSDDRGSW NLFGLDEGAP AQSSIDGLRA DMGTFEQRGT ASWYGKGFHG
RKTANGERFD MRAMTAAHPT LPLDSWVLVR NLSNNKVAVV RINDRGPYHG NRILDLSYAA
AKRLSFVNSG STKVEIRRLS RTEVAALGPE IEAGGTEAGD GSGADEMPDT ANALVPTKSK
ARKSTVKRKR P