| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3427 |
|---|
| Symbol | |
|---|
| ID | 4040272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3706298 |
|---|
| End bp | 3706675 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637978843 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_585568 |
|---|
| Protein GI | 94312358 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.105775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG CGCCGCGGTA CCTGAGGGGC GTCGTGGCGG GTTTCTGCGT GGCGCCGTCG
CTGGCGCTCG CGCAGCCGGC TTCGGCACCC GCCGGGCCGG CCGAAGCCGG CAAGCTGACC
GTGGAGGCGC AGGCGGCCCG CACGATGCAG GCGCGCAATC TCGCCGCGTC CTGCGCGGTC
TGCCACGGCA CGGACGGCAA GCCGCCCGCG GACGGTCCGA TTCCGCGACT GGCGGGCCGG
CAGCAGGCCG ATCTCGTCGA GCTGATGTTC AATTTCAAGA ACGGCAAGCG CTCCGGGACC
GTGATGCCGC AAATCGCCAA GGGCTATAGC GACGCGCAGA TCCTCGCGAT GGCCGCGTGG
TTCGCCGACC AGAAATAG
|
|---|
| Protein sequence | MTLAPRYLRG VVAGFCVAPS LALAQPASAP AGPAEAGKLT VEAQAARTMQ ARNLAASCAV
CHGTDGKPPA DGPIPRLAGR QQADLVELMF NFKNGKRSGT VMPQIAKGYS DAQILAMAAW
FADQK
|
|---|
| |