Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3426 |
Symbol | |
ID | 4040271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3705014 |
End bp | 3706294 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978842 |
Product | sulfide dehydrogenase (flavocytochrome), flavoprotein subunit |
Protein accession | YP_585567 |
Protein GI | 94312357 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.206209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGAC GCTCTGTCCT ACAGGCCGCC CTGGCCGGTG TCGCGGCCAC CACGCTCGGC ATGTTGACGC CGCGTCAGGC GCGCGCAGCA ACCGCAGCGA AGGTCGTGGT GGTCGGCGGT GGCTTTGGCG GTGCCACGGC CGCACGCTAC CTGCGCACCT GGAGTCACGG TGCTGTCGAC GTCACGCTGA TCGAGCCCGA CGAGGCGTTT GTGTCCTGCC CGCTGTCGAA TCTCGTTGTC GCCGGCTATC GCCAGATGGC CGACATCACG CTGCCCTACG ACACGCTGGT GAGTCGTCAC GGCGTGAAGC ACGTGCGCGA CACGGTCACG GCGATCGACC CGGCGGCACG CACTGTCCGG GTGGCGGGCG GAGGGACGCT GCCGTATGAC CGCCTGATCC TGTCCCCCGG CGTGGAGATG CAGTCCAGCG CGATCCCAGG TCTGGCACGT CCTGGCGGGG ATCAGATCGT GCACGCCTGG AAGGCCGGTC CGCAGACCGA CGTGCTGCGC CGCCAGCTCG CGGCGATGCC CGATGGCGGT ACGTTCGCGA TCACGATCCC GCTGGCGCCG TATCGTTGCC CACCCGGGCC GTACGAGCGG GCCTGCCTGG TTGCCGACTA TCTCAAGCAA CACAAGCCGC GCAGCAAGGT GCTCGTGCTC GACGCGAACC CGGACATCAC GTCGAAGGGC GCGTTGTTCC GCAAGGTCTG GGAGACACGC TACAAGGGGA TGATCGAGTA CCGGCCGCAG TTCGAGACCG TCGATGTCGA TCCGGCCACA CGCACGATCC GCTTTGACGT GCAGGACGAC GAGCGGGCCG ACGTCATCAA CCTGCTGCCA CCGCAGCGCG CCGGCGCCAT CGCCGTGGCC AGCGGTCTGG CGACGGCCAA CGGCCGCTGG TGCGAGGTCG ACTTCCTGAC CATGGCGTCG ACCGTGGCGC CTGACATCCA CGTCCTTGGC GACGCCGTCC AGATCGCGCC GCTGATGCCC AAGTCCGGCA CGATGGCCAA TCAGCACGGC AAGGTGGCCG CCGCCGCGAT CCTGCGGCTG CTGGCCGGTC AGGATCCGGA CCCGGAGCCG GTCTACACCA ACACCTGCTA CAGCTTCACG TCGTCGAACG AGGCCATCCA CGTGGCCAGC GTGCATCGCT ACGATGCCGG CGAGAAAACC ATGCTGACCG TGCCGGGGTC CGGCGGGCTG TCCGTCGCGC CAAGCAGGCG GGAAGGTGAG TACGGACTTG CCTGGGCCCA CAGCATCTGG GCCGACATGC TGGGCGCCTG A
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Protein sequence | MQRRSVLQAA LAGVAATTLG MLTPRQARAA TAAKVVVVGG GFGGATAARY LRTWSHGAVD VTLIEPDEAF VSCPLSNLVV AGYRQMADIT LPYDTLVSRH GVKHVRDTVT AIDPAARTVR VAGGGTLPYD RLILSPGVEM QSSAIPGLAR PGGDQIVHAW KAGPQTDVLR RQLAAMPDGG TFAITIPLAP YRCPPGPYER ACLVADYLKQ HKPRSKVLVL DANPDITSKG ALFRKVWETR YKGMIEYRPQ FETVDVDPAT RTIRFDVQDD ERADVINLLP PQRAGAIAVA SGLATANGRW CEVDFLTMAS TVAPDIHVLG DAVQIAPLMP KSGTMANQHG KVAAAAILRL LAGQDPDPEP VYTNTCYSFT SSNEAIHVAS VHRYDAGEKT MLTVPGSGGL SVAPSRREGE YGLAWAHSIW ADMLGA
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