| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3414 |
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| Symbol | |
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| ID | 4040258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3694153 |
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| End bp | 3695391 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978829 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_585555 |
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| Protein GI | 94312345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAT TGAACGGTAT CCGCGTACTC GACCTGAGCA AGGTGCTAGC CGGTCCTTTG
TGTGGCCAGT ACCTGGGGGA GCTTGGCGCA GAAGTCATCA AGGTTGAACC GGTTGGCCGT
GGCGACGACA CACGGGCATG GCTGCCGCAG GACCGAGGCC AGTCAGCGAC CTTCCTCGCG
GTCAACCACA ACAAGCGCAG CCTCGCTGTC GATCTGAAGA CCGCCGAGGG CAGGCAGATC
GTGCAGACGT TGGCAGCAAA ATCGGACGTG GTCCTGCAGG GCTTCGGCAG CGGTGCCGCC
GCACGGCTGG GCGTGGACTA CAAGACGCTG TCCGGCATGA ACCCGTCGCT GATCTACTGC
GAGATTTCCG GATACGGAAG AACGGGCCCG CTAGGCCAGG AACCTGGTTA CGACGTGATG
CTGCAGGCGT TCAGCGGCAT GGTCAGCACC ATGGGCGAAG CGGGTGGCAA GCTGGCGCGC
GCCAGCTTCT CGCCGGTAGA CCTGGGGACG GGCATGCACG CGTTCAGCGG CATCCTGGCG
GCCCTGCTCG AGAGACAGAA GACCGGGCGA GGCATGTTCC TGGAGGTGTC GTTGCTCGAC
ACAGCCATGG GGTTCATGAG CTACCTGGCA CAGAACTACT GGTGCAGCGG GAAGCTGCCG
CGCCCAATGG GAACCGCCCA TCCCGCCATG GCGCCATACC AGGTATTCGA GGCATCGGAC
GGCCCCATCA TGATTGGCGT TGGCAATGAT GCCCAGTGGC GGCGCTTTTG CCCGGTCGCC
GGACTCGACG ATGTCATCGA CGCACCCAAG TTCGCGACCA ATGCCGCGCG CGTCGCGCAT
TTCGATGAAA CCGTGGCGAT GGTGCAGGCG CGCATTGCGC TGCAGCCAGT CGCGCACTGG
ATCGAGGCAT TGCGCAAGGC GGGTGTGGCT TGCTCTCCCA TTCACACGCT CGGCGACGCA
TTGGCGCATC AGCAGGTTGC GGCACGCGAA CTGATTGTCG AATCCGATCA CCCCGTGCTT
GGCAAGGTTC GCAACGTTGG CTTGCCGATC CGCTTTGGCG AGGCGCCACG TGGTGCGCAT
CGCGCTCCGC CGCTGCTGGG CCAGCACACC GACGAGGTAC TCGGCGAGGC TGGCTACGGC
CCCGATGCTA TTGCCGATTT CAAGGCGCGA GGCGTGATCG CCACCGCCAA CCTGCCGCAG
GCTGATTCCC AGCCGGCCGC GGCCCCTCTC ACTGCATGA
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| Protein sequence | MIALNGIRVL DLSKVLAGPL CGQYLGELGA EVIKVEPVGR GDDTRAWLPQ DRGQSATFLA
VNHNKRSLAV DLKTAEGRQI VQTLAAKSDV VLQGFGSGAA ARLGVDYKTL SGMNPSLIYC
EISGYGRTGP LGQEPGYDVM LQAFSGMVST MGEAGGKLAR ASFSPVDLGT GMHAFSGILA
ALLERQKTGR GMFLEVSLLD TAMGFMSYLA QNYWCSGKLP RPMGTAHPAM APYQVFEASD
GPIMIGVGND AQWRRFCPVA GLDDVIDAPK FATNAARVAH FDETVAMVQA RIALQPVAHW
IEALRKAGVA CSPIHTLGDA LAHQQVAARE LIVESDHPVL GKVRNVGLPI RFGEAPRGAH
RAPPLLGQHT DEVLGEAGYG PDAIADFKAR GVIATANLPQ ADSQPAAAPL TA
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