Gene Rmet_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3390 
Symbol 
ID4040234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3663966 
End bp3664532 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID637978805 
Productgeneral secretion pathway M protein 
Protein accessionYP_585531 
Protein GI94312321 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAG GCATGTCAAC CAACATGGCC ACGCGCCTCG CCCGCTTCAA GCCGCGCGTC 
CCCGATCGGT GGCGCGAGCA GGTCGACGTA TTCTGGACCG CACGCAATCC GCGCGAACAG
GCCATCCTCG GCGGTGGCGC GGTGGTGCTT GTGCTGGTCT TTGGCTACCT GCTGCTGTGG
GAGCCGGCCT CCGTCGAGGG AGCGCGGCTG ATGCGCAACC TGCCGGTGCT GCGTGCGGAT
CTGGCCGAGA TGGAAACATT GGCGCAGGAA GCACGCGGCC TGTCGGCCAA TCGCGCCCCG
TCACTGCGTG GCGACGCGCT GACCCAGGCG CTGCAGGACA GCCTGGTGCA GCACGGCCTG
AAGGCCACGC GCCTGATGAC GACCGGCGAC AACGCCGTCC AGATTCAGTT GGACAAGGTG
CCGTTCGGGT CCGTGGCCGG TTGGCTGCAG GACGTGCGGC TACAGCAACG ACTGAAGGTC
ACTGATACAC GTATCAGCTA TGTGGGCGCC ACGGCGTTGG TCAACATGAC CGCGACGCTG
CAGGGCCCCG GCACCGGCGG CCGGTGA
 
Protein sequence
MRSGMSTNMA TRLARFKPRV PDRWREQVDV FWTARNPREQ AILGGGAVVL VLVFGYLLLW 
EPASVEGARL MRNLPVLRAD LAEMETLAQE ARGLSANRAP SLRGDALTQA LQDSLVQHGL
KATRLMTTGD NAVQIQLDKV PFGSVAGWLQ DVRLQQRLKV TDTRISYVGA TALVNMTATL
QGPGTGGR