Gene Rmet_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3388 
Symbol 
ID4040232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3661198 
End bp3662208 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content66% 
IMG OID637978803 
Productgeneral secretion pathway protein K 
Protein accessionYP_585529 
Protein GI94312319 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCATC ACCCCCCTCC CTCCTTCATG CGATCCCGCC AGCGTGGCGC CGCTGTCGTC 
ACGGCGCTGC TGATCGTGAC GCTGGCCGTG GTGGTGGTCT CCGGCATGCT CTGGCGCCAG
CAGGTGCAGA TCCGCTCGAT CGAGAATCAA CGGCTGATGG CGCAGGCCCA GTGGATCGAG
CGCGCCGCGG TGGACTGGGC ACGCCTGATT CTGCGCGACG ACCAGCGCCG CTCGAACGTC
GACTACCTCG GCGAGCCGTG GTCGGTCCCG GTGGCCGAAA CACGCCTGTC CGATTTTCTC
GGCGCCGGGC TTCGCACCGA TCAGGCCGGA GAAACGTCGT TCCTCTCCGG ACGCATCCTG
GATGCCCAGG CACGTTTCAA CCTGACCAAC CTCTATCAGT CGACGTCCGG CGAATCCGGT
CTCACGATCT CGATCGACCC CGCATCGATG CAGGCATTCG GACGCCTGCT TCAAACGCTC
GGCATGAACG CTGCGCTGGC GGAGAGCACT GCGCAATATG TCCTGCGCGC AGCCAAGGGT
GGATCGGGCG ACGGGCAACC CGTGCCGAGG CCGCCAGACA GCGTGCAAAG CCTGCTGGCG
ATTCCGGGCT TCACCCCGGA GATGATCGAC ACGCTCGAAC CGTTCGTGAC GGTGCTGCCC
GAACGCACCA CGGTCAACGC CAATACCGCG GACGCGGAGG TGCTGGCCGC CGTGATCGAC
AAGCTGCCGC TGGACCGCGC GCGCGAGCTT GTCCGCCAGC GCGACCGCGC CTATTTCAAC
AACACTGGCG ACATCACGAC ACAGTTGCAG ACGATTGCAC CAAAGGCGGT GATCACGGCC
AACACGCTCG ACGTGAGCTC GCGCTACTTC CTGATCTACG GTCTGGTGCG GCACGATCGG
GCGCGCCGCC TCAAGGTATC GCTGGTCGAG CGCCAGAATG TGCAGGGCAG CGGCAATACG
ACCCGCGTCG TCTGGTCGCG CGATGCCGAT GCCATGCCCC CGTCGAACTA A
 
Protein sequence
MRHHPPPSFM RSRQRGAAVV TALLIVTLAV VVVSGMLWRQ QVQIRSIENQ RLMAQAQWIE 
RAAVDWARLI LRDDQRRSNV DYLGEPWSVP VAETRLSDFL GAGLRTDQAG ETSFLSGRIL
DAQARFNLTN LYQSTSGESG LTISIDPASM QAFGRLLQTL GMNAALAEST AQYVLRAAKG
GSGDGQPVPR PPDSVQSLLA IPGFTPEMID TLEPFVTVLP ERTTVNANTA DAEVLAAVID
KLPLDRAREL VRQRDRAYFN NTGDITTQLQ TIAPKAVITA NTLDVSSRYF LIYGLVRHDR
ARRLKVSLVE RQNVQGSGNT TRVVWSRDAD AMPPSN