Gene Rmet_3386 details

Gene Information

• Locus tag: Rmet_3386
• ID: 4040230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007973
• Strand: +
• Start bp: 3660109
• End bp: 3660513
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637978801
• Product: general secretion pathway protein I
• Protein accession: YP_585527
• Protein GI: 94312317
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCGC CTCGCCTTCT TCAACATCGC CGCGAAGGCT TCACGCTGAT CGAGGTACTG 
GTCGCGCTGA CGATCCTCGC AGTGGCCCTG ACCGCCGCCA TGCGGGCGAT GGGTTCGATG 
ACCGAGTCGA GCATATCGCT CCAGCAGCGC ATGCTGGCTG AGTTCAGCGC CGAGAACCAC 
CTCGCCACAT TGCGACTTTC GAAGACCTGG CCCGAGCCCG GCACGCGTGG CTATGACTGC 
CCGCAGGGCG GCGCCACGCT CTGGTGCGAG GAGTCCGTCA CGAGCACGCC GAATCCCTCC 
TTCCGGCGCG TCGAGATCTC CGTCTTCCCT TCGGCCACCA ACAAGTCCGT GCGGCTGGCC 
TGGCTCGTCA CGCTGGTTCC GAATGAAACG CGCAATGTCC TCTGA 

 

Protein sequence

MSAPRLLQHR REGFTLIEVL VALTILAVAL TAAMRAMGSM TESSISLQQR MLAEFSAENH 
LATLRLSKTW PEPGTRGYDC PQGGATLWCE ESVTSTPNPS FRRVEISVFP SATNKSVRLA 
WLVTLVPNET RNVL