| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3385 |
|---|
| Symbol | |
|---|
| ID | 4040229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3659588 |
|---|
| End bp | 3660112 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637978800 |
|---|
| Product | general secretion pathway protein H |
|---|
| Protein accession | YP_585526 |
|---|
| Protein GI | 94312316 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGG CGACACCACG CGGCCTGACC GCATTCGCTC CTTGTCGCCG GACGTGCCGC
CGGGTCCCCG GCTTCACCCT GCTCGAACTG CTGGTGGTCA TGGTGATCGC CGGCATTGTT
ATCTCGCTGG TGGCCGTCAA TGCTTCGCCC AACGAACGCG GGCGCGTGCT CGACGACGGC
CAGCGCATCG CCCGCCTCTT CGAACTCGCC CAGGAAGACG CCCAGCTTGG CGCCCGCCCA
ATCGCCTGGG AGGGTGATGC CGGGGGCTGG CGCTTTCTCG AATCCACGCC GCAGGGCTGG
GTGCCGATGC GGACCGATAT CTTCGCGCCT GGTCAATGGC GGGTACGCCT GGACGGCGCC
GTCATTGCCG AAGGCGGGCG CCGCCTGGGT ACCGGCCCGG TTCGACTGGT CTTTGGGCGC
GAGCTGATCG ACGAACCGCA GCGCCTGATC CTCACGAGCG GCGCCATTCG CGTCGATGTG
ACCGGCGATG GCAGCGGCCG CTACGTGGCC ACGGTCCTGC AATGA
|
|---|
| Protein sequence | MRPATPRGLT AFAPCRRTCR RVPGFTLLEL LVVMVIAGIV ISLVAVNASP NERGRVLDDG
QRIARLFELA QEDAQLGARP IAWEGDAGGW RFLESTPQGW VPMRTDIFAP GQWRVRLDGA
VIAEGGRRLG TGPVRLVFGR ELIDEPQRLI LTSGAIRVDV TGDGSGRYVA TVLQ
|
|---|
| |