Gene Rmet_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3352 
Symbol 
ID4040196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3628399 
End bp3629298 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content53% 
IMG OID637978767 
Productcytidine/deoxycytidylate deaminase family protein 
Protein accessionYP_585493 
Protein GI94312283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGT GGTCACACTC TGTCTCCATA CCCATCAAAA CAGAGTTCGA GGTGGGGGCT 
GCATCGAACG AAGAAGCGAC CGGTTCCAAA AACCTTCCAC GTCTGAAGGA CCGGATCACT
GAGGAGCTGG TTATCGGCCT AGTGGGACCA GTGGGATCGG GATGCACCAC GACAGGCGCA
CAGATCGCGA CAATACTGGA GCGCGACTAC GGCTACAAAG TTTATCGTCA TAAGCTGAGC
GACTTGATTG TTAGTCACGC CCACCTAACG GGAGAGAAAT TTGATGATAA CCACCGTGGG
GCCGATCGCA TCAGTCAACT GCAACGTATA GGCGACAATC TTCGTCGACT GTGCGGACAT
GGTTACTTAG CAGCAAAAGC AATCGAAAGA ATTGCTCAAC TGCGCATGGA ATTCGGATTC
GGCAAAAGTC TTGATGGACT AGATGTGCCG CTGAGCGTCA GAACGGTACA TATCATCGAC
TCGCTCAAGA ACCCAAATGA ATTGCGCCTA CTCCGCGATA CATATGGCGG CATGTTCTGG
CTATTCGGGG TCTTCGCACC AGAAAGCGTG CGCAAGGACC GGCTGGAGCA CCACCAACGC
TTGGATCCAG AGAGCCTACA GGCAATCATC AAGCGCGACT ATAGCGAAGC TGAGAAGCAT
GGCCAAAGCG TAAGAGACGT GTTCCACCAA GCTGATTTTT TCGTCCGAAA CGATCAGTCA
AACGAGGGGA TGCTCACACT CGTCTTGAAT CGCTATTTGG AGATCCTCTT CGGCTACCCT
GTCCACACGC CGAATTCGGA CGAATCAGCG ATGGCGGCAG CTCATGCTGA GGCGAGCAAG
TCGGCCTGCT TGTCACGGCA AGTGGGAGCT GCAATTGCCA GTCCTCTAGC AGGCTGCTGA
 
Protein sequence
MVTWSHSVSI PIKTEFEVGA ASNEEATGSK NLPRLKDRIT EELVIGLVGP VGSGCTTTGA 
QIATILERDY GYKVYRHKLS DLIVSHAHLT GEKFDDNHRG ADRISQLQRI GDNLRRLCGH
GYLAAKAIER IAQLRMEFGF GKSLDGLDVP LSVRTVHIID SLKNPNELRL LRDTYGGMFW
LFGVFAPESV RKDRLEHHQR LDPESLQAII KRDYSEAEKH GQSVRDVFHQ ADFFVRNDQS
NEGMLTLVLN RYLEILFGYP VHTPNSDESA MAAAHAEASK SACLSRQVGA AIASPLAGC