Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3341 |
Symbol | |
ID | 4040177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3610952 |
End bp | 3612142 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637978748 |
Product | elongation factor Tu |
Protein accession | YP_585482 |
Protein GI | 94312272 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG AAAAGTTCGA GCGGACCAAG CCGCACGTGA ACGTAGGTAC GATTGGTCAC GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATTGCCA CGGTGCTGGC AGCCAAGTTC GGTGGCGCAG CCAAGAAGTA CGACGAAATC GACGCAGCGC CGGAAGAGAA GGCACGCGGC ATCACGATCA ACACCGCGCA CGTGGAATAC GAGACGGCCA ACCGTCACTA CGCCCACGTT GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCTGC GCAGATGGAC GGCGCGATTC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAGACGCG TGAGCACATC CTGCTGGCCC GTCAGGTTGG CGTGCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG GTGGACGACG CCGAGCTGCT CGAGCTGGTG GAAATGGAAG TGCGCGAGCT GCTGTCGAAG TACGAATTCC CGGGCGACGA CACGCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA GGCGACAAGG GCGAACTGGG TGAAGTGGCG ATCATGAACC TGGCCGACGC GCTGGACACG TACATCCCGA CGCCGGAGCG CGCTGTGGAC GGTACGTTCC TGATGCCGGT GGAAGACGTG TTCTCGATCT CGGGCCGCGG TACCGTGGTG ACCGGTCGTA TCGAGCGTGG CGTGATCAAG GTCGGTGAAG AAATCGAAAT CGTGGGTATC CGCCCGACGG TGAAGACGAC TTGCACGGGC GTGGAAATGT TCCGCAAGCT GCTGGATCAA GGCCAGGCTG GTGACAACGT TGGTCTGCTG CTGCGCGGCA CGAAGCGCGA AGACGTGGAG CGTGGTCAAG TTCTGTGCAA GCCGGGCTCG ATCAAGCCGC ACACGCACTT CACGGGTGAG GTGTACATTC TGTCGAAGGA CGAAGGTGGT CGTCACACGC CGTTCTTCAA CAACTACCGC CCGCAGTTCT ATTTCCGTAC GACCGACGTG ACCGGCTCGA TCGAGCTGCC GCAGGACAAG GAAATGGTGA TGCCGGGTGA CAACGTGTCG ATCACTGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCTATCCGC GAAGGTGGCC GTACCGTCGG CGCCGGCGTT GTGGCAAAGA TCCTCGACTA A
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Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLAAKF GGAAKKYDEI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YEFPGDDTPI IKGSAKLALE GDKGELGEVA IMNLADALDT YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGVIK VGEEIEIVGI RPTVKTTCTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS IKPHTHFTGE VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPQDK EMVMPGDNVS ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKILD
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