Gene Rmet_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3337 
SymbolrplA 
ID4040172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3608470 
End bp3609165 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID637978743 
Product50S ribosomal protein L1 
Protein accessionYP_585478 
Protein GI94312268 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG TTTCCAAGCG CGTCGCCGCC AACAAGGCGA AGATCGAGCG TACCAAGTTC 
TACCCGATCG ACGAGGCCCT GAGCCTGGTC AAGAGCTGCG CTTCGGCAAA GTTCGACGAG
TCGATCGACG TGGCCGTGCA ACTGGGCATC GACGCCAAGA AGTCGGACCA GGTCGTGCGT
GGTTCCGTGG TGCTGCCGGC TGGTACCGGT AAGTCGGTTC GCGTTGCCGT GTTCGCCCAG
GGTGAAAAGG CTGAAGCCGC CAAGGCCGCC GGTGCTGACG TGGTCGGCAT GGAAGACCTG
GCCGAGCAAG TCAAGGCCGG TAACCTGGAC TTCGACATCG TGATCGCTTC GCCGGACACG
ATGCGTATCG TTGGTACGCT GGGTCAGATC CTCGGCCCGC GTGGCCTGAT GCCGAACCCG
AAGGTTGGCA CCGTGACGCC GGACGTAGCC CAGGCTGTGA AGAACGCCAA GGCTGGTCAG
GTTCAGTTCC GTGTCGATAA GGCCGGTATC ATCCACGCCA CCATCGGTCG TCGCTCGTTC
GAAGACACCG CGCTGAAGAG CAACCTGAGC GCCCTGCTGG ACGCACTGGT CAAGGCTAAG
CCGGCTACGA GCAAGGGTGT CTACCTGCGC AAGATCGCTG TGTCGTCCAC GATGGGCGTT
GGCGTTCGCG TCGAACAGAC TTCGCTGTCG GCCTGA
 
Protein sequence
MAKVSKRVAA NKAKIERTKF YPIDEALSLV KSCASAKFDE SIDVAVQLGI DAKKSDQVVR 
GSVVLPAGTG KSVRVAVFAQ GEKAEAAKAA GADVVGMEDL AEQVKAGNLD FDIVIASPDT
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA QAVKNAKAGQ VQFRVDKAGI IHATIGRRSF
EDTALKSNLS ALLDALVKAK PATSKGVYLR KIAVSSTMGV GVRVEQTSLS A