Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3337 |
Symbol | rplA |
ID | 4040172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3608470 |
End bp | 3609165 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978743 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_585478 |
Protein GI | 94312268 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAGG TTTCCAAGCG CGTCGCCGCC AACAAGGCGA AGATCGAGCG TACCAAGTTC TACCCGATCG ACGAGGCCCT GAGCCTGGTC AAGAGCTGCG CTTCGGCAAA GTTCGACGAG TCGATCGACG TGGCCGTGCA ACTGGGCATC GACGCCAAGA AGTCGGACCA GGTCGTGCGT GGTTCCGTGG TGCTGCCGGC TGGTACCGGT AAGTCGGTTC GCGTTGCCGT GTTCGCCCAG GGTGAAAAGG CTGAAGCCGC CAAGGCCGCC GGTGCTGACG TGGTCGGCAT GGAAGACCTG GCCGAGCAAG TCAAGGCCGG TAACCTGGAC TTCGACATCG TGATCGCTTC GCCGGACACG ATGCGTATCG TTGGTACGCT GGGTCAGATC CTCGGCCCGC GTGGCCTGAT GCCGAACCCG AAGGTTGGCA CCGTGACGCC GGACGTAGCC CAGGCTGTGA AGAACGCCAA GGCTGGTCAG GTTCAGTTCC GTGTCGATAA GGCCGGTATC ATCCACGCCA CCATCGGTCG TCGCTCGTTC GAAGACACCG CGCTGAAGAG CAACCTGAGC GCCCTGCTGG ACGCACTGGT CAAGGCTAAG CCGGCTACGA GCAAGGGTGT CTACCTGCGC AAGATCGCTG TGTCGTCCAC GATGGGCGTT GGCGTTCGCG TCGAACAGAC TTCGCTGTCG GCCTGA
|
Protein sequence | MAKVSKRVAA NKAKIERTKF YPIDEALSLV KSCASAKFDE SIDVAVQLGI DAKKSDQVVR GSVVLPAGTG KSVRVAVFAQ GEKAEAAKAA GADVVGMEDL AEQVKAGNLD FDIVIASPDT MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA QAVKNAKAGQ VQFRVDKAGI IHATIGRRSF EDTALKSNLS ALLDALVKAK PATSKGVYLR KIAVSSTMGV GVRVEQTSLS A
|
| |